Cluster: B65.bin_10_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_1175 | 1310447 | 1311559 | - | GT111 |
| pfam | B65_contig_437 | B65_contig_437_1176 | 1311643 | 1312608 | - | Ldh_1_N | Ldh_1_C |
| TC | B65_contig_437 | B65_contig_437_1177 | 1312784 | 1314637 | - | 3.A.1.135.6 |
| TC | B65_contig_437 | B65_contig_437_1178 | 1314630 | 1316951 | - | 3.A.1.135.6 |
Gene ID: B65_contig_437_1175
Type: CAZyme
Location: 1310447 - 1311559 (-)
Type: CAZyme
Location: 1310447 - 1311559 (-)
Gene ID: B65_contig_437_1176
Type: pfam
Location: 1311643 - 1312608 (-)
Type: pfam
Location: 1311643 - 1312608 (-)
Gene ID: B65_contig_437_1177
Type: TC
Location: 1312784 - 1314637 (-)
Type: TC
Location: 1312784 - 1314637 (-)
Gene ID: B65_contig_437_1178
Type: TC
Location: 1314630 - 1316951 (-)
Type: TC
Location: 1314630 - 1316951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_1175 | vegan > omnivore | 1.22780 | 0.00484 |
| B65_contig_437_1175 | vegetarian > omnivore | 1.38335 | 0.00102 |
| B65_contig_437_1176 | vegan > omnivore | 1.25433 | 0.00484 |
| B65_contig_437_1176 | vegetarian > omnivore | 1.28517 | 0.00102 |