Cluster: B65.bin_10_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_723 | 835769 | 837451 | + | GH13_31 |
| TC | B65_contig_437 | B65_contig_437_724 | 837640 | 839277 | + | 2.A.58.2.2 |
| pfam | B65_contig_437 | B65_contig_437_725 | 839297 | 840142 | + | VCA0040-like |
| CAZyme | B65_contig_437 | B65_contig_437_726 | 840286 | 841278 | + | CE4 |
Gene ID: B65_contig_437_723
Type: CAZyme
Location: 835769 - 837451 (+)
Type: CAZyme
Location: 835769 - 837451 (+)
Gene ID: B65_contig_437_724
Type: TC
Location: 837640 - 839277 (+)
Type: TC
Location: 837640 - 839277 (+)
Gene ID: B65_contig_437_725
Type: pfam
Location: 839297 - 840142 (+)
Type: pfam
Location: 839297 - 840142 (+)
Gene ID: B65_contig_437_726
Type: CAZyme
Location: 840286 - 841278 (+)
Type: CAZyme
Location: 840286 - 841278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_724 | vegetarian > omnivore | 1.32347 | 0.00102 |
| B65_contig_437_725 | vegan > omnivore | 1.75316 | 0.00484 |
| B65_contig_437_725 | vegetarian > omnivore | 1.17602 | 0.00102 |