Cluster: B65.bin_10_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_291 | 322253 | 322981 | - | CE4 |
| TC | B65_contig_71 | B65_contig_71_292 | 323199 | 324404 | - | 3.A.1.115.1 |
| TC | B65_contig_71 | B65_contig_71_293 | 324401 | 325177 | - | 3.A.1.128.6 |
| NULL(UNKNOWN) | B65_contig_71 | B65_contig_71_294 | 325244 | 325876 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B65_contig_71 | B65_contig_71_295 | 325891 | 326904 | - | GT2 |
Gene ID: B65_contig_71_291
Type: CAZyme
Location: 322253 - 322981 (-)
Type: CAZyme
Location: 322253 - 322981 (-)
Gene ID: B65_contig_71_292
Type: TC
Location: 323199 - 324404 (-)
Type: TC
Location: 323199 - 324404 (-)
Gene ID: B65_contig_71_293
Type: TC
Location: 324401 - 325177 (-)
Type: TC
Location: 324401 - 325177 (-)
Gene ID: B65_contig_71_294
Type:
Location: 325244 - 325876 (-)
Type:
Location: 325244 - 325876 (-)
Gene ID: B65_contig_71_295
Type: CAZyme
Location: 325891 - 326904 (-)
Type: CAZyme
Location: 325891 - 326904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_291 | vegetarian > omnivore | 1.55677 | 0.00102 |
| B65_contig_71_291 | vegetarian > vegan | 2.24479 | 0.00455 |
| B65_contig_71_292 | vegetarian > omnivore | 1.35995 | 0.00102 |
| B65_contig_71_292 | vegetarian > vegan | 1.60641 | 0.00455 |