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Cluster: B65.bin_10_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B65_contig_437 B65_contig_437_185 201558 203624 - GH42
CAZyme B65_contig_437 B65_contig_437_186 203922 206054 + GH3
STP B65_contig_437 B65_contig_437_187 206051 207850 + HATPase_c | dCache_1
TF B65_contig_437 B65_contig_437_188 207901 209499 + HTH_AraC
TC B65_contig_437 B65_contig_437_189 209681 211402 + 3.A.1.1.29
TC B65_contig_437 B65_contig_437_190 211473 212438 + 3.A.1.1.29
TC B65_contig_437 B65_contig_437_191 212450 213364 + 3.A.1.1.29
CAZyme B65_contig_437 B65_contig_437_192 213384 214535 + GH8
CAZyme B65_contig_437 B65_contig_437_193 214546 217404 + GH115
CAZyme B65_contig_437 B65_contig_437_194 217401 219104 + CE17
CAZyme B65_contig_437 B65_contig_437_195 219183 220748 + CBM91 | GH43_12
TF B65_contig_437 B65_contig_437_196 220853 221866 + LacI
pfam B65_contig_437 B65_contig_437_197 222555 223901 + SBP_bac_8
TC B65_contig_437 B65_contig_437_198 224127 225545 + 3.A.1.1.27
TC B65_contig_437 B65_contig_437_199 225545 226390 + 3.A.1.1.27
Gene ID: B65_contig_437_185
Type: CAZyme
Location: 201558 - 203624 (-)
Gene ID: B65_contig_437_186
Type: CAZyme
Location: 203922 - 206054 (+)
Gene ID: B65_contig_437_187
Type: STP
Location: 206051 - 207850 (+)
Gene ID: B65_contig_437_188
Type: TF
Location: 207901 - 209499 (+)
Gene ID: B65_contig_437_189
Type: TC
Location: 209681 - 211402 (+)
Gene ID: B65_contig_437_190
Type: TC
Location: 211473 - 212438 (+)
Gene ID: B65_contig_437_191
Type: TC
Location: 212450 - 213364 (+)
Gene ID: B65_contig_437_192
Type: CAZyme
Location: 213384 - 214535 (+)
Gene ID: B65_contig_437_193
Type: CAZyme
Location: 214546 - 217404 (+)
Gene ID: B65_contig_437_194
Type: CAZyme
Location: 217401 - 219104 (+)
Gene ID: B65_contig_437_195
Type: CAZyme
Location: 219183 - 220748 (+)
Gene ID: B65_contig_437_196
Type: TF
Location: 220853 - 221866 (+)
Gene ID: B65_contig_437_197
Type: pfam
Location: 222555 - 223901 (+)
Gene ID: B65_contig_437_198
Type: TC
Location: 224127 - 225545 (+)
Gene ID: B65_contig_437_199
Type: TC
Location: 225545 - 226390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B65_contig_437_185 vegetarian > omnivore 1.10339 0.00102
B65_contig_437_185 vegetarian > vegan 1.11381 0.00455
B65_contig_437_189 vegetarian > vegan 1.27191 0.00455
B65_contig_437_193 vegetarian > omnivore 1.26689 0.00102
B65_contig_437_195 vegetarian > omnivore 1.31045 0.00102
B65_contig_437_197 vegan > omnivore 1.50152 0.00484
B65_contig_437_197 vegetarian > omnivore 1.74088 0.00102
B65_contig_437_198 vegan > omnivore 1.41023 0.00484
B65_contig_437_198 vegetarian > omnivore 2.12697 0.00102
B65_contig_437_199 vegetarian > omnivore 2.06382 0.00102
B65_contig_437_199 vegan > omnivore 1.32496 0.00484

🧭 Explore Read Mapping of CGC

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