Cluster: B65.bin_10_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_2272 | 2474626 | 2475720 | - | GH23 |
| TC | B65_contig_71 | B65_contig_71_2273 | 2475884 | 2476645 | + | 2.A.78.1.1 |
| TC | B65_contig_71 | B65_contig_71_2274 | 2476635 | 2476967 | + | 2.A.78.1.1 |
Gene ID: B65_contig_71_2272
Type: CAZyme
Location: 2474626 - 2475720 (-)
Type: CAZyme
Location: 2474626 - 2475720 (-)
Gene ID: B65_contig_71_2273
Type: TC
Location: 2475884 - 2476645 (+)
Type: TC
Location: 2475884 - 2476645 (+)
Gene ID: B65_contig_71_2274
Type: TC
Location: 2476635 - 2476967 (+)
Type: TC
Location: 2476635 - 2476967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_2272 | vegan > omnivore | 2.45026 | 0.00484 |
| B65_contig_71_2272 | vegetarian > omnivore | 2.85978 | 0.00102 |