Cluster: B65.bin_10_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_1812 | 1957764 | 1959959 | - | GH133 |
| NULL(UNKNOWN) | B65_contig_71 | B65_contig_71_1813 | 1960221 | 1960718 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B65_contig_71 | B65_contig_71_1814 | 1960745 | 1961467 | + | 3.A.1.25.6 |
Gene ID: B65_contig_71_1812
Type: CAZyme
Location: 1957764 - 1959959 (-)
Type: CAZyme
Location: 1957764 - 1959959 (-)
Gene ID: B65_contig_71_1813
Type:
Location: 1960221 - 1960718 (+)
Type:
Location: 1960221 - 1960718 (+)
Gene ID: B65_contig_71_1814
Type: TC
Location: 1960745 - 1961467 (+)
Type: TC
Location: 1960745 - 1961467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_1814 | vegan > omnivore | 1.25228 | 0.00484 |
| B65_contig_71_1814 | vegetarian > omnivore | 1.70680 | 0.00102 |