Cluster: B65.bin_10_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B65_contig_71 | B65_contig_71_1391 | 1495887 | 1497500 | + | 3.A.1.112.5 |
| TF | B65_contig_71 | B65_contig_71_1392 | 1497636 | 1498079 | + | LytTR |
| pfam | B65_contig_71 | B65_contig_71_1393 | 1498134 | 1498592 | + | DUF3021 |
| CAZyme | B65_contig_71 | B65_contig_71_1394 | 1498735 | 1501602 | + | GH3 |
Gene ID: B65_contig_71_1391
Type: TC
Location: 1495887 - 1497500 (+)
Type: TC
Location: 1495887 - 1497500 (+)
Gene ID: B65_contig_71_1392
Type: TF
Location: 1497636 - 1498079 (+)
Type: TF
Location: 1497636 - 1498079 (+)
Gene ID: B65_contig_71_1393
Type: pfam
Location: 1498134 - 1498592 (+)
Type: pfam
Location: 1498134 - 1498592 (+)
Gene ID: B65_contig_71_1394
Type: CAZyme
Location: 1498735 - 1501602 (+)
Type: CAZyme
Location: 1498735 - 1501602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_1391 | vegetarian > omnivore | 1.27111 | 0.00102 |
| B65_contig_71_1392 | vegetarian > omnivore | 1.05162 | 0.00102 |
| B65_contig_71_1393 | vegan > omnivore | 1.59590 | 0.00484 |
| B65_contig_71_1393 | vegetarian > omnivore | 2.06756 | 0.00102 |