Cluster: B65.bin_10_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_1168 | 1244164 | 1245996 | + | GH18 |
| pfam | B65_contig_71 | B65_contig_71_1169 | 1246086 | 1246850 | + | Amidase_3 |
| pfam | B65_contig_71 | B65_contig_71_1170 | 1246866 | 1250075 | - | DUF6240 | DUF6240 |
| CAZyme | B65_contig_71 | B65_contig_71_1171 | 1250322 | 1252220 | - | CBM48 | GH13_9 |
| STP | B65_contig_71 | B65_contig_71_1172 | 1252268 | 1254934 | - | TPR_2 |
| TC | B65_contig_71 | B65_contig_71_1173 | 1255097 | 1256485 | - | 2.A.86.1.8 |
Gene ID: B65_contig_71_1168
Type: CAZyme
Location: 1244164 - 1245996 (+)
Type: CAZyme
Location: 1244164 - 1245996 (+)
Gene ID: B65_contig_71_1169
Type: pfam
Location: 1246086 - 1246850 (+)
Type: pfam
Location: 1246086 - 1246850 (+)
Gene ID: B65_contig_71_1170
Type: pfam
Location: 1246866 - 1250075 (-)
Type: pfam
Location: 1246866 - 1250075 (-)
Gene ID: B65_contig_71_1171
Type: CAZyme
Location: 1250322 - 1252220 (-)
Type: CAZyme
Location: 1250322 - 1252220 (-)
Gene ID: B65_contig_71_1172
Type: STP
Location: 1252268 - 1254934 (-)
Type: STP
Location: 1252268 - 1254934 (-)
Gene ID: B65_contig_71_1173
Type: TC
Location: 1255097 - 1256485 (-)
Type: TC
Location: 1255097 - 1256485 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_1168 | vegetarian > omnivore | 1.21368 | 0.00102 |
| B65_contig_71_1170 | vegetarian > omnivore | 1.18473 | 0.00102 |