Cluster: B65.bin_10_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_1145 | 1224124 | 1225218 | + | GT28 |
| pfam | B65_contig_71 | B65_contig_71_1146 | 1225315 | 1225731 | - | HIT | DcpS_C |
| pfam | B65_contig_71 | B65_contig_71_1147 | 1225823 | 1226818 | - | SCP2 |
| TC | B65_contig_71 | B65_contig_71_1148 | 1226883 | 1227929 | - | 9.B.104.1.3 |
Gene ID: B65_contig_71_1145
Type: CAZyme
Location: 1224124 - 1225218 (+)
Type: CAZyme
Location: 1224124 - 1225218 (+)
Gene ID: B65_contig_71_1146
Type: pfam
Location: 1225315 - 1225731 (-)
Type: pfam
Location: 1225315 - 1225731 (-)
Gene ID: B65_contig_71_1147
Type: pfam
Location: 1225823 - 1226818 (-)
Type: pfam
Location: 1225823 - 1226818 (-)
Gene ID: B65_contig_71_1148
Type: TC
Location: 1226883 - 1227929 (-)
Type: TC
Location: 1226883 - 1227929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_1147 | vegetarian > omnivore | 1.23677 | 0.00102 |
| B65_contig_71_1147 | vegetarian > vegan | 1.14960 | 0.00455 |