Cluster: B65.bin_10_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_1092 | 1182415 | 1183428 | - | GH23 |
| NULL(UNKNOWN) | B65_contig_71 | B65_contig_71_1093 | 1183435 | 1186035 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B65_contig_71 | B65_contig_71_1094 | 1186032 | 1188488 | - | 3.A.7.14.2 |
Gene ID: B65_contig_71_1092
Type: CAZyme
Location: 1182415 - 1183428 (-)
Type: CAZyme
Location: 1182415 - 1183428 (-)
Gene ID: B65_contig_71_1093
Type:
Location: 1183435 - 1186035 (-)
Type:
Location: 1183435 - 1186035 (-)
Gene ID: B65_contig_71_1094
Type: TC
Location: 1186032 - 1188488 (-)
Type: TC
Location: 1186032 - 1188488 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_1092 | vegetarian > omnivore | 2.75187 | 0.00102 |
| B65_contig_71_1092 | vegetarian > vegan | 2.36157 | 0.00455 |
| B65_contig_71_1094 | vegetarian > omnivore | 1.59102 | 0.00102 |
| B65_contig_71_1094 | vegetarian > vegan | 2.35936 | 0.00455 |