Cluster: B50.CMAG_3_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B50_contig_4164 | B50_contig_4164_19 | 24532 | 27147 | + | 3.A.5.2.2 |
| pfam | B50_contig_4164 | B50_contig_4164_20 | 27261 | 27914 | - | DUF6459 |
| CAZyme | B50_contig_4164 | B50_contig_4164_21 | 28024 | 28986 | - | CBM50 |
Gene ID: B50_contig_4164_19
Type: TC
Location: 24532 - 27147 (+)
Type: TC
Location: 24532 - 27147 (+)
Gene ID: B50_contig_4164_20
Type: pfam
Location: 27261 - 27914 (-)
Type: pfam
Location: 27261 - 27914 (-)
Gene ID: B50_contig_4164_21
Type: CAZyme
Location: 28024 - 28986 (-)
Type: CAZyme
Location: 28024 - 28986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia sp001808955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.