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Cluster: B43.CMAG_3_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B43_contig_1353 B43_contig_1353_2353 2620090 2621199 - GH76
NULL(UNKNOWN) B43_contig_1353 B43_contig_1353_2354 2621214 2622926 - NULL(UNKNOWN)
[View Structural Homologs]
pfam B43_contig_1353 B43_contig_1353_2355 2622943 2623836 - ROK
CAZyme B43_contig_1353 B43_contig_1353_2356 2623840 2626227 - GH38
TC B43_contig_1353 B43_contig_1353_2357 2626260 2627177 - 3.A.1.1.34
TC B43_contig_1353 B43_contig_1353_2358 2627191 2628087 - 3.A.1.1.20
TC B43_contig_1353 B43_contig_1353_2359 2628099 2629400 - 3.A.1.1.3
Gene ID: B43_contig_1353_2353
Type: CAZyme
Location: 2620090 - 2621199 (-)
Gene ID: B43_contig_1353_2354
Type:
Location: 2621214 - 2622926 (-)
Gene ID: B43_contig_1353_2355
Type: pfam
Location: 2622943 - 2623836 (-)
Gene ID: B43_contig_1353_2356
Type: CAZyme
Location: 2623840 - 2626227 (-)
Gene ID: B43_contig_1353_2357
Type: TC
Location: 2626260 - 2627177 (-)
Gene ID: B43_contig_1353_2358
Type: TC
Location: 2627191 - 2628087 (-)
Gene ID: B43_contig_1353_2359
Type: TC
Location: 2628099 - 2629400 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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