PROTEIN: B43_contig_1353_2354
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Protein File & Metadata
Source:
B43_contig_1353_2354.pdb
Genome ID:
Protein ID:
B43_contig_1353_2354
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Protein Sequence
MPQQIKFDKY PEKTVQGYKA VQGWEDVREC LDKAAKENGV LTAEFYPGVY REELVNELAK 60 LGFAMFDAES CTISDEEYQE LVAPFVTDDR VFGVMNTLRL EDIYREEKIE ALRRQIQSCN 120 GPAIVYGTGA ALVAPQGKIV YFDMPRWEIQ CRFQKGLTNW KTDNAAEEKL RKFKRGFFVE 180 WRMADRKKKE LFEKMDYVLD TVIPGSPKMV SGDGFRAGLD MLSHEPFRLV PYYAPEVWGG 240 QWMKRVCGLD PKEKNYAWAF DGVPEENSVF LRFGDVRMEF PSINVVFYRP RPLLGERVHA 300 RFGDEFPIRF DFLDTMGGQN LSLQVHPLTE YIQNTFGMHY TQDESYYILD CDEDAVVYLG 360 LKEGVDKEEM LAALHEAQDK GTTFDAERYV NCWPAKKHDH FLIPAGTIHC SGKNSMVLEV 420 SATPYIFTFK LWDWGRLGLD GRPRPVHLKH GEKVIQWDRT TGWVQENLLN QFSVLEQEDG 480 YCVEHTGLHE REFIETKRDT LQKEHLFAGV GSVQMCNLID GEGAVISSPK GAFSPFTVHY 540 AETFILPAAI TEFTVKPLGD ECKILRAYVR 570
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DQJ1-F1-model_v4 | 221 | 569 | 1 | 314 | 0.7065 |
0.9175 |
| AF-Q2G223-F1-model_v4 | 225 | 570 | 1 | 312 | 0.7037 |
0.9165 |
| AF-A0A132Z9P5-F1-model_v4 | 221 | 570 | 1 | 316 | 0.701 |
0.9086 |
| AF-Q2FWB3-F1-model_v4 | 237 | 569 | 1 | 285 | 0.6818 |
0.9161 |
| AF-A0A0H3GS87-F1-model_v4 | 225 | 570 | 1 | 390 | 0.6175 |
0.8309 |
| AF-P25081-F1-model_v4 | 225 | 570 | 1 | 390 | 0.6173 |
0.8294 |
| AF-Q32FG5-F1-model_v4 | 225 | 570 | 1 | 390 | 0.6172 |
0.8292 |
| AF-P00946-F1-model_v4 | 225 | 570 | 1 | 390 | 0.617 |
0.829 |
| AF-Q9FZH5-F1-model_v4 | 114 | 570 | 1 | 435 | 0.6115 |
0.7063 |
| AF-A0A0D2GQV2-F1-model_v4 | 217 | 570 | 1 | 407 | 0.6114 |
0.8215 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-G2SXW7-F1-model_v4 | GH1 | 19 | 570 | 224 | 768 | 0.4611 |
0.5572 |
| AF-D4KJA3-F1-model_v4 | GH1 | 18 | 570 | 224 | 768 | 0.4577 |
0.5522 |
| AF-D4KYD8-F1-model_v4 | GH1 | 18 | 570 | 224 | 768 | 0.4552 |
0.5492 |
| AF-A0A1D9P395-F1-model_v4 | GH1 | 18 | 570 | 223 | 765 | 0.4528 |
0.5467 |
| AF-A0A7U6KFF6-F1-model_v4 | GH1 | 16 | 570 | 225 | 765 | 0.4497 |
0.5452 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1qwr-assembly2.cif.gz_B | 224 | 569 | 1 | 314 | 0.705 |
0.9161 |
| 1zx5-assembly1.cif.gz_A | 219 | 570 | 1 | 299 | 0.6868 |
0.91 |
| 5zvr-assembly1.cif.gz_A | 221 | 570 | 1 | 386 | 0.6228 |
0.8232 |
| 5zt4-assembly1.cif.gz_A | 221 | 570 | 1 | 390 | 0.6202 |
0.8243 |
| 5zuw-assembly1.cif.gz_A | 221 | 570 | 1 | 390 | 0.6202 |
0.8243 |
| 5zv0-assembly1.cif.gz_A | 221 | 570 | 1 | 386 | 0.6201 |
0.8196 |
| 5zt5-assembly1.cif.gz_A | 221 | 570 | 1 | 391 | 0.6187 |
0.8234 |
| 5zvx-assembly1.cif.gz_A | 221 | 570 | 1 | 391 | 0.6181 |
0.8227 |
| 5zvu-assembly1.cif.gz_A | 224 | 570 | 1 | 380 | 0.6171 |
0.8152 |
| 5zuy-assembly1.cif.gz_A | 221 | 570 | 1 | 391 | 0.6127 |
0.8155 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05511-F1-model_v4 | 221 | 569 | 1 | 315 | 0.7052 |
0.9154 |
| AF-Q59935-F1-model_v4 | 221 | 570 | 1 | 314 | 0.7027 |
0.9164 |
| AF-P39841-F1-model_v4 | 220 | 569 | 1 | 316 | 0.7013 |
0.9092 |
| AF-O31646-F1-model_v4 | 220 | 569 | 1 | 315 | 0.6972 |
0.9052 |
| AF-P25081-F1-model_v4 | 225 | 570 | 1 | 390 | 0.6173 |
0.8294 |
| AF-Q83KZ1-F1-model_v4 | 225 | 570 | 1 | 390 | 0.6172 |
0.8293 |
| AF-P00946-F1-model_v4 | 225 | 570 | 1 | 390 | 0.617 |
0.829 |
| AF-Q9FZH5-F1-model_v4 | 114 | 570 | 1 | 435 | 0.6115 |
0.7063 |
| AF-Q8HXX2-F1-model_v4 | 217 | 570 | 1 | 422 | 0.6023 |
0.8258 |
| AF-Q9M884-F1-model_v4 | 99 | 570 | 1 | 426 | 0.6011 |
0.701 |