Cluster: B36.bin_9_CGC29
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_2473 | 2647233 | 2647979 | - | 2.A.79.1.5 |
| pfam | B36_contig_110 | B36_contig_110_2474 | 2648018 | 2648575 | - | His_Phos_1 |
| pfam | B36_contig_110 | B36_contig_110_2475 | 2648694 | 2649563 | - | HK |
| TC | B36_contig_110 | B36_contig_110_2476 | 2649710 | 2650222 | - | 3.A.1.26.5 |
| peptidase | B36_contig_110 | B36_contig_110_2477 | 2650379 | 2651608 | + | M20.UPB |
| TC | B36_contig_110 | B36_contig_110_2478 | 2652015 | 2653433 | - | 2.A.25.1.4 |
| CAZyme | B36_contig_110 | B36_contig_110_2479 | 2654141 | 2661334 | - | CE8 | PL1 |
| STP | B36_contig_110 | B36_contig_110_2480 | 2661641 | 2663809 | - | HATPase_c | HisKA | Response_reg |
| STP | B36_contig_110 | B36_contig_110_2481 | 2663809 | 2664627 | - | SBP_bac_3 |
| TC | B36_contig_110 | B36_contig_110_2482 | 2664946 | 2667108 | - | 3.A.16.1.2 |
Gene ID: B36_contig_110_2473
Type: TC
Location: 2647233 - 2647979 (-)
Type: TC
Location: 2647233 - 2647979 (-)
Gene ID: B36_contig_110_2474
Type: pfam
Location: 2648018 - 2648575 (-)
Type: pfam
Location: 2648018 - 2648575 (-)
Gene ID: B36_contig_110_2475
Type: pfam
Location: 2648694 - 2649563 (-)
Type: pfam
Location: 2648694 - 2649563 (-)
Gene ID: B36_contig_110_2476
Type: TC
Location: 2649710 - 2650222 (-)
Type: TC
Location: 2649710 - 2650222 (-)
Gene ID: B36_contig_110_2477
Type: peptidase
Location: 2650379 - 2651608 (+)
Type: peptidase
Location: 2650379 - 2651608 (+)
Gene ID: B36_contig_110_2478
Type: TC
Location: 2652015 - 2653433 (-)
Type: TC
Location: 2652015 - 2653433 (-)
Gene ID: B36_contig_110_2479
Type: CAZyme
Location: 2654141 - 2661334 (-)
Type: CAZyme
Location: 2654141 - 2661334 (-)
Gene ID: B36_contig_110_2480
Type: STP
Location: 2661641 - 2663809 (-)
Type: STP
Location: 2661641 - 2663809 (-)
Gene ID: B36_contig_110_2481
Type: STP
Location: 2663809 - 2664627 (-)
Type: STP
Location: 2663809 - 2664627 (-)
Gene ID: B36_contig_110_2482
Type: TC
Location: 2664946 - 2667108 (-)
Type: TC
Location: 2664946 - 2667108 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_2473 | vegetarian > vegan | 1.65989 | 0.00110 |
| B36_contig_110_2475 | vegetarian > vegan | 1.55276 | 0.00110 |
| B36_contig_110_2476 | vegetarian > vegan | 1.09859 | 0.00110 |
| B36_contig_110_2477 | vegetarian > vegan | 1.32047 | 0.00110 |
| B36_contig_110_2479 | vegetarian > vegan | 1.39836 | 0.00110 |
| B36_contig_110_2480 | vegetarian > vegan | 1.91907 | 0.00110 |
| B36_contig_110_2481 | vegetarian > vegan | 1.66823 | 0.00110 |