Cluster: B36.bin_9_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_2362 | 2512300 | 2515026 | - | 3.A.1.122.2 |
| peptidase | B36_contig_110 | B36_contig_110_2363 | 2515310 | 2516419 | + | M23.UPB |
| TC | B36_contig_110 | B36_contig_110_2364 | 2516529 | 2517206 | - | 2.A.38.4.6 |
| TC | B36_contig_110 | B36_contig_110_2365 | 2517807 | 2519108 | - | 2.A.38.4.3 |
| CAZyme | B36_contig_110 | B36_contig_110_2366 | 2519459 | 2521156 | - | GH43_10 |
Gene ID: B36_contig_110_2362
Type: TC
Location: 2512300 - 2515026 (-)
Type: TC
Location: 2512300 - 2515026 (-)
Gene ID: B36_contig_110_2363
Type: peptidase
Location: 2515310 - 2516419 (+)
Type: peptidase
Location: 2515310 - 2516419 (+)
Gene ID: B36_contig_110_2364
Type: TC
Location: 2516529 - 2517206 (-)
Type: TC
Location: 2516529 - 2517206 (-)
Gene ID: B36_contig_110_2365
Type: TC
Location: 2517807 - 2519108 (-)
Type: TC
Location: 2517807 - 2519108 (-)
Gene ID: B36_contig_110_2366
Type: CAZyme
Location: 2519459 - 2521156 (-)
Type: CAZyme
Location: 2519459 - 2521156 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_2362 | vegetarian > vegan | 1.17711 | 0.00110 |
| B36_contig_110_2363 | vegetarian > vegan | 2.05752 | 0.00110 |
| B36_contig_110_2364 | vegetarian > vegan | 2.30874 | 0.00110 |
| B36_contig_110_2365 | vegetarian > vegan | 2.18675 | 0.00110 |
| B36_contig_110_2366 | vegetarian > vegan | 1.12225 | 0.00110 |