Cluster: B36.bin_9_CGC24
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: B36.bin_9
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B36_contig_110 | B36_contig_110_2203 | 2321238 | 2322500 | - | GT4 |
| pfam | B36_contig_110 | B36_contig_110_2204 | 2322599 | 2324035 | - | DUF362 | DUF362 |
| pfam | B36_contig_110 | B36_contig_110_2205 | 2324037 | 2324951 | - | ATPgrasp_TupA |
| CAZyme | B36_contig_110 | B36_contig_110_2206 | 2324962 | 2326041 | - | GT4 |
| TC | B36_contig_110 | B36_contig_110_2207 | 2326053 | 2327495 | - | 9.B.18.1.3 |
| TC | B36_contig_110 | B36_contig_110_2208 | 2327541 | 2328470 | - | 8.A.3.2.3 |
| pfam | B36_contig_110 | B36_contig_110_2209 | 2328502 | 2329245 | - | Wzz |
| TC | B36_contig_110 | B36_contig_110_2210 | 2329794 | 2330582 | + | 3.A.1.17.13 |
| TC | B36_contig_110 | B36_contig_110_2211 | 2330579 | 2331397 | + | 3.A.1.17.4 |
Gene ID: B36_contig_110_2203
Type: CAZyme
Location: 2321238 - 2322500 (-)
Type: CAZyme
Location: 2321238 - 2322500 (-)
Gene ID: B36_contig_110_2204
Type: pfam
Location: 2322599 - 2324035 (-)
Type: pfam
Location: 2322599 - 2324035 (-)
Gene ID: B36_contig_110_2205
Type: pfam
Location: 2324037 - 2324951 (-)
Type: pfam
Location: 2324037 - 2324951 (-)
Gene ID: B36_contig_110_2206
Type: CAZyme
Location: 2324962 - 2326041 (-)
Type: CAZyme
Location: 2324962 - 2326041 (-)
Gene ID: B36_contig_110_2207
Type: TC
Location: 2326053 - 2327495 (-)
Type: TC
Location: 2326053 - 2327495 (-)
Gene ID: B36_contig_110_2208
Type: TC
Location: 2327541 - 2328470 (-)
Type: TC
Location: 2327541 - 2328470 (-)
Gene ID: B36_contig_110_2209
Type: pfam
Location: 2328502 - 2329245 (-)
Type: pfam
Location: 2328502 - 2329245 (-)
Gene ID: B36_contig_110_2210
Type: TC
Location: 2329794 - 2330582 (+)
Type: TC
Location: 2329794 - 2330582 (+)
Gene ID: B36_contig_110_2211
Type: TC
Location: 2330579 - 2331397 (+)
Type: TC
Location: 2330579 - 2331397 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_2204 | vegetarian > vegan | 1.03899 | 0.00110 |
| B36_contig_110_2205 | vegetarian > vegan | 1.34507 | 0.00110 |
| B36_contig_110_2206 | vegetarian > omnivore | 1.32098 | 0.01253 |
| B36_contig_110_2206 | vegetarian > vegan | 1.23577 | 0.00110 |
| B36_contig_110_2211 | vegetarian > omnivore | 1.08997 | 0.01253 |