Cluster: B127.bin_4_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B127_contig_2084 | B127_contig_2084_68 | 101631 | 104732 | - | 1.B.14.6.1 |
| pfam | B127_contig_2084 | B127_contig_2084_69 | 104838 | 106226 | - | Por_Secre_tail |
| CAZyme | B127_contig_2084 | B127_contig_2084_70 | 106281 | 107390 | - | GH26 |
| CAZyme | B127_contig_2084 | B127_contig_2084_71 | 107494 | 108693 | - | GH130_1 |
| CAZyme | B127_contig_2084 | B127_contig_2084_72 | 109125 | 111917 | - | CBM67 | GH78 |
| TF | B127_contig_2084 | B127_contig_2084_73 | 112042 | 112920 | - | HTH_AraC |
| CAZyme | B127_contig_2084 | B127_contig_2084_74 | 113283 | 114545 | - | CE15 |
| TC | B127_contig_2084 | B127_contig_2084_75 | 114815 | 116143 | + | 3.A.5.1.1 |
| pfam | B127_contig_2084 | B127_contig_2084_76 | 116284 | 117162 | + | THF_DHG_CYH | THF_DHG_CYH_C |
| pfam | B127_contig_2084 | B127_contig_2084_77 | 117235 | 118386 | - | Cyt_bd_oxida_II |
| TC | B127_contig_2084 | B127_contig_2084_78 | 118393 | 119949 | - | 3.D.4.3.2 |
Gene ID: B127_contig_2084_68
Type: TC
Location: 101631 - 104732 (-)
Type: TC
Location: 101631 - 104732 (-)
Gene ID: B127_contig_2084_69
Type: pfam
Location: 104838 - 106226 (-)
Type: pfam
Location: 104838 - 106226 (-)
Gene ID: B127_contig_2084_70
Type: CAZyme
Location: 106281 - 107390 (-)
Type: CAZyme
Location: 106281 - 107390 (-)
Gene ID: B127_contig_2084_71
Type: CAZyme
Location: 107494 - 108693 (-)
Type: CAZyme
Location: 107494 - 108693 (-)
Gene ID: B127_contig_2084_72
Type: CAZyme
Location: 109125 - 111917 (-)
Type: CAZyme
Location: 109125 - 111917 (-)
Gene ID: B127_contig_2084_73
Type: TF
Location: 112042 - 112920 (-)
Type: TF
Location: 112042 - 112920 (-)
Gene ID: B127_contig_2084_74
Type: CAZyme
Location: 113283 - 114545 (-)
Type: CAZyme
Location: 113283 - 114545 (-)
Gene ID: B127_contig_2084_75
Type: TC
Location: 114815 - 116143 (+)
Type: TC
Location: 114815 - 116143 (+)
Gene ID: B127_contig_2084_76
Type: pfam
Location: 116284 - 117162 (+)
Type: pfam
Location: 116284 - 117162 (+)
Gene ID: B127_contig_2084_77
Type: pfam
Location: 117235 - 118386 (-)
Type: pfam
Location: 117235 - 118386 (-)
Gene ID: B127_contig_2084_78
Type: TC
Location: 118393 - 119949 (-)
Type: TC
Location: 118393 - 119949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.