Cluster: B127.bin_4_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_2084 | B127_contig_2084_46 | 65137 | 68487 | + | GH84 |
| CAZyme | B127_contig_2084 | B127_contig_2084_47 | 68542 | 70812 | + | GH92 |
| CAZyme | B127_contig_2084 | B127_contig_2084_48 | 70852 | 73197 | + | GH20 |
| CAZyme | B127_contig_2084 | B127_contig_2084_49 | 73279 | 75345 | + | GH20 |
| pfam | B127_contig_2084 | B127_contig_2084_50 | 75434 | 76756 | + | MFS_1 | MFS_1 |
| CAZyme | B127_contig_2084 | B127_contig_2084_51 | 76865 | 77824 | + | GH130_2 |
| CAZyme | B127_contig_2084 | B127_contig_2084_52 | 77832 | 80084 | + | GH92 |
| pfam | B127_contig_2084 | B127_contig_2084_53 | 80253 | 81329 | - | DUF4857 |
| NULL(UNKNOWN) | B127_contig_2084 | B127_contig_2084_54 | 81365 | 82036 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B127_contig_2084 | B127_contig_2084_55 | 82061 | 82954 | - | 3.A.1.131.1 |
Gene ID: B127_contig_2084_46
Type: CAZyme
Location: 65137 - 68487 (+)
Type: CAZyme
Location: 65137 - 68487 (+)
Gene ID: B127_contig_2084_47
Type: CAZyme
Location: 68542 - 70812 (+)
Type: CAZyme
Location: 68542 - 70812 (+)
Gene ID: B127_contig_2084_48
Type: CAZyme
Location: 70852 - 73197 (+)
Type: CAZyme
Location: 70852 - 73197 (+)
Gene ID: B127_contig_2084_49
Type: CAZyme
Location: 73279 - 75345 (+)
Type: CAZyme
Location: 73279 - 75345 (+)
Gene ID: B127_contig_2084_50
Type: pfam
Location: 75434 - 76756 (+)
Type: pfam
Location: 75434 - 76756 (+)
Gene ID: B127_contig_2084_51
Type: CAZyme
Location: 76865 - 77824 (+)
Type: CAZyme
Location: 76865 - 77824 (+)
Gene ID: B127_contig_2084_52
Type: CAZyme
Location: 77832 - 80084 (+)
Type: CAZyme
Location: 77832 - 80084 (+)
Gene ID: B127_contig_2084_53
Type: pfam
Location: 80253 - 81329 (-)
Type: pfam
Location: 80253 - 81329 (-)
Gene ID: B127_contig_2084_54
Type:
Location: 81365 - 82036 (-)
Type:
Location: 81365 - 82036 (-)
Gene ID: B127_contig_2084_55
Type: TC
Location: 82061 - 82954 (-)
Type: TC
Location: 82061 - 82954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.