Cluster: B127.bin_4_CGC52
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B127_contig_2058 | B127_contig_2058_143 | 182018 | 189454 | + | 9.A.25.1.1 |
| pfam | B127_contig_2058 | B127_contig_2058_144 | 189543 | 190451 | + | Ppx-GppA |
| TC | B127_contig_2058 | B127_contig_2058_145 | 190757 | 192106 | + | 3.D.5.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_146 | 192135 | 193346 | + | 3.D.5.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_147 | 193358 | 194059 | + | 3.D.5.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_148 | 194075 | 194698 | + | 3.D.5.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_149 | 194723 | 195337 | + | 3.D.5.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_150 | 195368 | 196633 | + | 3.D.5.1.1 |
| NULL(UNKNOWN) | B127_contig_2058 | B127_contig_2058_151 | 196941 | 197162 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B127_contig_2058 | B127_contig_2058_152 | 197505 | 198899 | - | GH109 |
Gene ID: B127_contig_2058_143
Type: TC
Location: 182018 - 189454 (+)
Type: TC
Location: 182018 - 189454 (+)
Gene ID: B127_contig_2058_144
Type: pfam
Location: 189543 - 190451 (+)
Type: pfam
Location: 189543 - 190451 (+)
Gene ID: B127_contig_2058_145
Type: TC
Location: 190757 - 192106 (+)
Type: TC
Location: 190757 - 192106 (+)
Gene ID: B127_contig_2058_146
Type: TC
Location: 192135 - 193346 (+)
Type: TC
Location: 192135 - 193346 (+)
Gene ID: B127_contig_2058_147
Type: TC
Location: 193358 - 194059 (+)
Type: TC
Location: 193358 - 194059 (+)
Gene ID: B127_contig_2058_148
Type: TC
Location: 194075 - 194698 (+)
Type: TC
Location: 194075 - 194698 (+)
Gene ID: B127_contig_2058_149
Type: TC
Location: 194723 - 195337 (+)
Type: TC
Location: 194723 - 195337 (+)
Gene ID: B127_contig_2058_150
Type: TC
Location: 195368 - 196633 (+)
Type: TC
Location: 195368 - 196633 (+)
Gene ID: B127_contig_2058_151
Type:
Location: 196941 - 197162 (+)
Type:
Location: 196941 - 197162 (+)
Gene ID: B127_contig_2058_152
Type: CAZyme
Location: 197505 - 198899 (-)
Type: CAZyme
Location: 197505 - 198899 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.