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Cluster: B127.bin_4_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B127_contig_6909 B127_contig_6909_39 40227 42965 + 9.B.14.3.1
pfam B127_contig_6909 B127_contig_6909_40 43063 44145 + APH
TF B127_contig_6909 B127_contig_6909_41 44218 47097 - HTH_AraC
CAZyme B127_contig_6909 B127_contig_6909_42 47695 48900 - GH88
STP B127_contig_6909 B127_contig_6909_43 49407 50588 - Aminotran_1_2
CAZyme B127_contig_6909 B127_contig_6909_44 50800 53820 - GH85
pfam B127_contig_6909 B127_contig_6909_45 53901 55691 - SusD-like | SusD-like_2
TC B127_contig_6909 B127_contig_6909_46 55713 58496 - 1.B.14.6.13
Gene ID: B127_contig_6909_39
Type: TC
Location: 40227 - 42965 (+)
Gene ID: B127_contig_6909_40
Type: pfam
Location: 43063 - 44145 (+)
Gene ID: B127_contig_6909_41
Type: TF
Location: 44218 - 47097 (-)
Gene ID: B127_contig_6909_42
Type: CAZyme
Location: 47695 - 48900 (-)
Gene ID: B127_contig_6909_43
Type: STP
Location: 49407 - 50588 (-)
Gene ID: B127_contig_6909_44
Type: CAZyme
Location: 50800 - 53820 (-)
Gene ID: B127_contig_6909_45
Type: pfam
Location: 53901 - 55691 (-)
Gene ID: B127_contig_6909_46
Type: TC
Location: 55713 - 58496 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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