Cluster: B127.bin_4_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_98 | B127_contig_98_331 | 426163 | 429147 | + | GH3 |
| CAZyme | B127_contig_98 | B127_contig_98_332 | 429251 | 432946 | - | GH33 |
| STP | B127_contig_98 | B127_contig_98_333 | 433276 | 433446 | - | Fer4 | Fer4 |
| TC | B127_contig_98 | B127_contig_98_334 | 433671 | 434441 | + | 1.B.44.1.1 |
| pfam | B127_contig_98 | B127_contig_98_335 | 434650 | 435285 | - | Hydrolase | HAD_2 |
| pfam | B127_contig_98 | B127_contig_98_336 | 435312 | 436979 | - | PRK |
| TC | B127_contig_98 | B127_contig_98_337 | 437181 | 438998 | + | 2.A.58.2.2 |
Gene ID: B127_contig_98_331
Type: CAZyme
Location: 426163 - 429147 (+)
Type: CAZyme
Location: 426163 - 429147 (+)
Gene ID: B127_contig_98_332
Type: CAZyme
Location: 429251 - 432946 (-)
Type: CAZyme
Location: 429251 - 432946 (-)
Gene ID: B127_contig_98_333
Type: STP
Location: 433276 - 433446 (-)
Type: STP
Location: 433276 - 433446 (-)
Gene ID: B127_contig_98_334
Type: TC
Location: 433671 - 434441 (+)
Type: TC
Location: 433671 - 434441 (+)
Gene ID: B127_contig_98_335
Type: pfam
Location: 434650 - 435285 (-)
Type: pfam
Location: 434650 - 435285 (-)
Gene ID: B127_contig_98_336
Type: pfam
Location: 435312 - 436979 (-)
Type: pfam
Location: 435312 - 436979 (-)
Gene ID: B127_contig_98_337
Type: TC
Location: 437181 - 438998 (+)
Type: TC
Location: 437181 - 438998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.