Cluster: B127.bin_4_CGC31
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 15
- Substrate:
- Genome ID: B127.bin_4
- CGC Family ID: CGCFAM_07422
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_98 | B127_contig_98_25 | 36244 | 37350 | + | GH43_33 |
| NULL(UNKNOWN) | B127_contig_98 | B127_contig_98_26 | 37430 | 38887 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B127_contig_98 | B127_contig_98_27 | 39092 | 40381 | - | GH144 |
| CAZyme | B127_contig_98 | B127_contig_98_28 | 40429 | 43584 | - | GH29 |
| CAZyme | B127_contig_98 | B127_contig_98_29 | 43612 | 46029 | - | GH29 |
| CAZyme | B127_contig_98 | B127_contig_98_30 | 46087 | 47766 | - | GH144 |
| TC | B127_contig_98 | B127_contig_98_31 | 47824 | 49326 | - | 8.A.46.1.3 |
| TC | B127_contig_98 | B127_contig_98_32 | 49350 | 52412 | - | 1.B.14.6.1 |
| TF | B127_contig_98 | B127_contig_98_33 | 52723 | 53187 | - | GerE |
| STP | B127_contig_98 | B127_contig_98_34 | 53188 | 55506 | - | Y_Y_Y |
| CAZyme | B127_contig_98 | B127_contig_98_35 | 56023 | 58290 | + | GH3 |
| NULL(UNKNOWN) | B127_contig_98 | B127_contig_98_36 | 58268 | 58378 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | B127_contig_98 | B127_contig_98_37 | 58477 | 60024 | + | S1_11 |
| CAZyme | B127_contig_98 | B127_contig_98_38 | 60316 | 63186 | - | GH106 |
| pfam | B127_contig_98 | B127_contig_98_39 | 63200 | 64534 | - | PKD | BT_3987-like_N | DUF5013 | PKD_4 |
| pfam | B127_contig_98 | B127_contig_98_40 | 64563 | 66311 | - | SusD_RagB | SusD-like_3 |
| TC | B127_contig_98 | B127_contig_98_41 | 66328 | 69147 | - | 1.B.14.6.1 |
| pfam | B127_contig_98 | B127_contig_98_42 | 69183 | 70922 | - | SusD_RagB | SusD-like_3 |
| TC | B127_contig_98 | B127_contig_98_43 | 70934 | 74137 | - | 1.B.14.6.1 |
| CAZyme | B127_contig_98 | B127_contig_98_44 | 74207 | 75736 | - | GH28 |
| CAZyme | B127_contig_98 | B127_contig_98_45 | 75776 | 77725 | - | CE20 | CE20 |
| CAZyme | B127_contig_98 | B127_contig_98_46 | 77734 | 79941 | - | GH36 |
| CAZyme | B127_contig_98 | B127_contig_98_47 | 79981 | 81498 | - | CE20 |
| CAZyme | B127_contig_98 | B127_contig_98_48 | 81544 | 83526 | - | GH110 |
| CAZyme | B127_contig_98 | B127_contig_98_49 | 83557 | 84921 | - | GH175 |
| pfam | B127_contig_98 | B127_contig_98_50 | 85009 | 86883 | - | Por_Secre_tail |
| CAZyme | B127_contig_98 | B127_contig_98_51 | 86961 | 89204 | - | GH92 |
| CAZyme | B127_contig_98 | B127_contig_98_52 | 89245 | 91422 | - | GH92 |
Gene ID: B127_contig_98_25
Type: CAZyme
Location: 36244 - 37350 (+)
Type: CAZyme
Location: 36244 - 37350 (+)
Gene ID: B127_contig_98_26
Type:
Location: 37430 - 38887 (-)
Type:
Location: 37430 - 38887 (-)
Gene ID: B127_contig_98_27
Type: CAZyme
Location: 39092 - 40381 (-)
Type: CAZyme
Location: 39092 - 40381 (-)
Gene ID: B127_contig_98_28
Type: CAZyme
Location: 40429 - 43584 (-)
Type: CAZyme
Location: 40429 - 43584 (-)
Gene ID: B127_contig_98_29
Type: CAZyme
Location: 43612 - 46029 (-)
Type: CAZyme
Location: 43612 - 46029 (-)
Gene ID: B127_contig_98_30
Type: CAZyme
Location: 46087 - 47766 (-)
Type: CAZyme
Location: 46087 - 47766 (-)
Gene ID: B127_contig_98_31
Type: TC
Location: 47824 - 49326 (-)
Type: TC
Location: 47824 - 49326 (-)
Gene ID: B127_contig_98_32
Type: TC
Location: 49350 - 52412 (-)
Type: TC
Location: 49350 - 52412 (-)
Gene ID: B127_contig_98_33
Type: TF
Location: 52723 - 53187 (-)
Type: TF
Location: 52723 - 53187 (-)
Gene ID: B127_contig_98_34
Type: STP
Location: 53188 - 55506 (-)
Type: STP
Location: 53188 - 55506 (-)
Gene ID: B127_contig_98_35
Type: CAZyme
Location: 56023 - 58290 (+)
Type: CAZyme
Location: 56023 - 58290 (+)
Gene ID: B127_contig_98_36
Type:
Location: 58268 - 58378 (-)
Type:
Location: 58268 - 58378 (-)
Gene ID: B127_contig_98_37
Type: sulfatase
Location: 58477 - 60024 (+)
Type: sulfatase
Location: 58477 - 60024 (+)
Gene ID: B127_contig_98_38
Type: CAZyme
Location: 60316 - 63186 (-)
Type: CAZyme
Location: 60316 - 63186 (-)
Gene ID: B127_contig_98_39
Type: pfam
Location: 63200 - 64534 (-)
Type: pfam
Location: 63200 - 64534 (-)
Gene ID: B127_contig_98_40
Type: pfam
Location: 64563 - 66311 (-)
Type: pfam
Location: 64563 - 66311 (-)
Gene ID: B127_contig_98_41
Type: TC
Location: 66328 - 69147 (-)
Type: TC
Location: 66328 - 69147 (-)
Gene ID: B127_contig_98_42
Type: pfam
Location: 69183 - 70922 (-)
Type: pfam
Location: 69183 - 70922 (-)
Gene ID: B127_contig_98_43
Type: TC
Location: 70934 - 74137 (-)
Type: TC
Location: 70934 - 74137 (-)
Gene ID: B127_contig_98_44
Type: CAZyme
Location: 74207 - 75736 (-)
Type: CAZyme
Location: 74207 - 75736 (-)
Gene ID: B127_contig_98_45
Type: CAZyme
Location: 75776 - 77725 (-)
Type: CAZyme
Location: 75776 - 77725 (-)
Gene ID: B127_contig_98_46
Type: CAZyme
Location: 77734 - 79941 (-)
Type: CAZyme
Location: 77734 - 79941 (-)
Gene ID: B127_contig_98_47
Type: CAZyme
Location: 79981 - 81498 (-)
Type: CAZyme
Location: 79981 - 81498 (-)
Gene ID: B127_contig_98_48
Type: CAZyme
Location: 81544 - 83526 (-)
Type: CAZyme
Location: 81544 - 83526 (-)
Gene ID: B127_contig_98_49
Type: CAZyme
Location: 83557 - 84921 (-)
Type: CAZyme
Location: 83557 - 84921 (-)
Gene ID: B127_contig_98_50
Type: pfam
Location: 85009 - 86883 (-)
Type: pfam
Location: 85009 - 86883 (-)
Gene ID: B127_contig_98_51
Type: CAZyme
Location: 86961 - 89204 (-)
Type: CAZyme
Location: 86961 - 89204 (-)
Gene ID: B127_contig_98_52
Type: CAZyme
Location: 89245 - 91422 (-)
Type: CAZyme
Location: 89245 - 91422 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.