Cluster: B127.bin_4_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_38 | B127_contig_38_236 | 271845 | 272816 | - | GH23 |
| pfam | B127_contig_38 | B127_contig_38_237 | 272832 | 274130 | - | CHU_C |
| CAZyme | B127_contig_38 | B127_contig_38_238 | 274327 | 276291 | + | CBM50 | CBM50 | CBM50 | CBM50 |
| pfam | B127_contig_38 | B127_contig_38_239 | 276304 | 276981 | + | OMP_b-brl_2 |
| STP | B127_contig_38 | B127_contig_38_240 | 277062 | 277598 | - | cNMP_binding |
| TC | B127_contig_38 | B127_contig_38_241 | 277775 | 278095 | + | 2.A.7.1.4 |
Gene ID: B127_contig_38_236
Type: CAZyme
Location: 271845 - 272816 (-)
Type: CAZyme
Location: 271845 - 272816 (-)
Gene ID: B127_contig_38_237
Type: pfam
Location: 272832 - 274130 (-)
Type: pfam
Location: 272832 - 274130 (-)
Gene ID: B127_contig_38_238
Type: CAZyme
Location: 274327 - 276291 (+)
Type: CAZyme
Location: 274327 - 276291 (+)
Gene ID: B127_contig_38_239
Type: pfam
Location: 276304 - 276981 (+)
Type: pfam
Location: 276304 - 276981 (+)
Gene ID: B127_contig_38_240
Type: STP
Location: 277062 - 277598 (-)
Type: STP
Location: 277062 - 277598 (-)
Gene ID: B127_contig_38_241
Type: TC
Location: 277775 - 278095 (+)
Type: TC
Location: 277775 - 278095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.