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Cluster: B127.bin_4_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B127_contig_38 B127_contig_38_14 14943 16364 + 9.B.18.1.3
TC B127_contig_38 B127_contig_38_15 16374 18152 + 2.A.49.6.4
TF B127_contig_38 B127_contig_38_16 18213 18923 - LytTR
pfam B127_contig_38 B127_contig_38_17 18920 19927 - His_kinase
TC B127_contig_38 B127_contig_38_18 20106 21278 + 2.A.6.2.29
TC B127_contig_38 B127_contig_38_19 21295 24441 + 2.A.6.2.22
TC B127_contig_38 B127_contig_38_20 24468 25844 + 2.A.6.2.9
CAZyme B127_contig_38 B127_contig_38_21 26043 28295 + GT20
CAZyme B127_contig_38 B127_contig_38_22 28316 30106 + GH15
NULL(UNKNOWN) B127_contig_38 B127_contig_38_23 30992 31186 - NULL(UNKNOWN)
[View Structural Homologs]
TC B127_contig_38 B127_contig_38_24 31201 33594 - 9.A.8.1.6
Gene ID: B127_contig_38_14
Type: TC
Location: 14943 - 16364 (+)
Gene ID: B127_contig_38_15
Type: TC
Location: 16374 - 18152 (+)
Gene ID: B127_contig_38_16
Type: TF
Location: 18213 - 18923 (-)
Gene ID: B127_contig_38_17
Type: pfam
Location: 18920 - 19927 (-)
Gene ID: B127_contig_38_18
Type: TC
Location: 20106 - 21278 (+)
Gene ID: B127_contig_38_19
Type: TC
Location: 21295 - 24441 (+)
Gene ID: B127_contig_38_20
Type: TC
Location: 24468 - 25844 (+)
Gene ID: B127_contig_38_21
Type: CAZyme
Location: 26043 - 28295 (+)
Gene ID: B127_contig_38_22
Type: CAZyme
Location: 28316 - 30106 (+)
Gene ID: B127_contig_38_23
Type:
Location: 30992 - 31186 (-)
Gene ID: B127_contig_38_24
Type: TC
Location: 31201 - 33594 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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