Cluster: B127.bin_4_CGC22
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: B127.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B127_contig_223 | B127_contig_223_53 | 90081 | 91097 | + | 2.A.20.1.4 |
| CAZyme | B127_contig_223 | B127_contig_223_54 | 91323 | 93032 | - | GH110 |
| CAZyme | B127_contig_223 | B127_contig_223_55 | 93062 | 95356 | - | GH92 |
| CAZyme | B127_contig_223 | B127_contig_223_56 | 95446 | 97401 | - | CE20 | CE20 |
| CAZyme | B127_contig_223 | B127_contig_223_57 | 97446 | 99707 | - | GH3 |
| CAZyme | B127_contig_223 | B127_contig_223_58 | 99710 | 102655 | - | CBM32 | GH2 |
| CAZyme | B127_contig_223 | B127_contig_223_59 | 102841 | 104916 | - | GH36 |
| CAZyme | B127_contig_223 | B127_contig_223_60 | 104936 | 107110 | - | GH36 |
| TC | B127_contig_223 | B127_contig_223_61 | 107664 | 108329 | + | 2.A.115.2.14 |
| pfam | B127_contig_223 | B127_contig_223_62 | 108418 | 109044 | + | DUF4923 |
| TC | B127_contig_223 | B127_contig_223_63 | 109584 | 110408 | - | 1.A.23.2.1 |
| TC | B127_contig_223 | B127_contig_223_64 | 110732 | 111412 | - | 1.A.8.13.3 |
Gene ID: B127_contig_223_53
Type: TC
Location: 90081 - 91097 (+)
Type: TC
Location: 90081 - 91097 (+)
Gene ID: B127_contig_223_54
Type: CAZyme
Location: 91323 - 93032 (-)
Type: CAZyme
Location: 91323 - 93032 (-)
Gene ID: B127_contig_223_55
Type: CAZyme
Location: 93062 - 95356 (-)
Type: CAZyme
Location: 93062 - 95356 (-)
Gene ID: B127_contig_223_56
Type: CAZyme
Location: 95446 - 97401 (-)
Type: CAZyme
Location: 95446 - 97401 (-)
Gene ID: B127_contig_223_57
Type: CAZyme
Location: 97446 - 99707 (-)
Type: CAZyme
Location: 97446 - 99707 (-)
Gene ID: B127_contig_223_58
Type: CAZyme
Location: 99710 - 102655 (-)
Type: CAZyme
Location: 99710 - 102655 (-)
Gene ID: B127_contig_223_59
Type: CAZyme
Location: 102841 - 104916 (-)
Type: CAZyme
Location: 102841 - 104916 (-)
Gene ID: B127_contig_223_60
Type: CAZyme
Location: 104936 - 107110 (-)
Type: CAZyme
Location: 104936 - 107110 (-)
Gene ID: B127_contig_223_61
Type: TC
Location: 107664 - 108329 (+)
Type: TC
Location: 107664 - 108329 (+)
Gene ID: B127_contig_223_62
Type: pfam
Location: 108418 - 109044 (+)
Type: pfam
Location: 108418 - 109044 (+)
Gene ID: B127_contig_223_63
Type: TC
Location: 109584 - 110408 (-)
Type: TC
Location: 109584 - 110408 (-)
Gene ID: B127_contig_223_64
Type: TC
Location: 110732 - 111412 (-)
Type: TC
Location: 110732 - 111412 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.