Cluster: B111.bin_19_CGC31
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_00128
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_1436 | B111_contig_1436_79 | 104869 | 107064 | - | GH97 |
| CAZyme | B111_contig_1436 | B111_contig_1436_80 | 107077 | 108954 | - | GH13_46 |
| CAZyme | B111_contig_1436 | B111_contig_1436_81 | 109163 | 110500 | - | GH13 |
| CAZyme | B111_contig_1436 | B111_contig_1436_82 | 110511 | 112829 | - | GH13_36 |
| pfam | B111_contig_1436 | B111_contig_1436_83 | 112937 | 114751 | - | SusE |
| TC | B111_contig_1436 | B111_contig_1436_84 | 114775 | 116433 | - | 8.A.46.1.1 |
| TC | B111_contig_1436 | B111_contig_1436_85 | 116447 | 118723 | - | 1.B.14.6.1 |
| TC | B111_contig_1436 | B111_contig_1436_86 | 118720 | 119469 | - | 1.B.14.6.1 |
| TC | B111_contig_1436 | B111_contig_1436_87 | 119531 | 120838 | - | 2.A.2.6.2 |
| TC | B111_contig_1436 | B111_contig_1436_88 | 121061 | 122443 | + | 8.A.59.2.1 |
| TF | B111_contig_1436 | B111_contig_1436_89 | 122445 | 123197 | + | LytTR |
| CAZyme | B111_contig_1436 | B111_contig_1436_90 | 123286 | 125886 | - | GH77 |
| peptidase | B111_contig_1436 | B111_contig_1436_91 | 125969 | 126898 | - | S33.UPW |
| pfam | B111_contig_1436 | B111_contig_1436_92 | 127036 | 128280 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| CAZyme | B111_contig_1436 | B111_contig_1436_93 | 128282 | 129343 | - | GH43_26 |
Gene ID: B111_contig_1436_79
Type: CAZyme
Location: 104869 - 107064 (-)
Type: CAZyme
Location: 104869 - 107064 (-)
Gene ID: B111_contig_1436_80
Type: CAZyme
Location: 107077 - 108954 (-)
Type: CAZyme
Location: 107077 - 108954 (-)
Gene ID: B111_contig_1436_81
Type: CAZyme
Location: 109163 - 110500 (-)
Type: CAZyme
Location: 109163 - 110500 (-)
Gene ID: B111_contig_1436_82
Type: CAZyme
Location: 110511 - 112829 (-)
Type: CAZyme
Location: 110511 - 112829 (-)
Gene ID: B111_contig_1436_83
Type: pfam
Location: 112937 - 114751 (-)
Type: pfam
Location: 112937 - 114751 (-)
Gene ID: B111_contig_1436_84
Type: TC
Location: 114775 - 116433 (-)
Type: TC
Location: 114775 - 116433 (-)
Gene ID: B111_contig_1436_85
Type: TC
Location: 116447 - 118723 (-)
Type: TC
Location: 116447 - 118723 (-)
Gene ID: B111_contig_1436_86
Type: TC
Location: 118720 - 119469 (-)
Type: TC
Location: 118720 - 119469 (-)
Gene ID: B111_contig_1436_87
Type: TC
Location: 119531 - 120838 (-)
Type: TC
Location: 119531 - 120838 (-)
Gene ID: B111_contig_1436_88
Type: TC
Location: 121061 - 122443 (+)
Type: TC
Location: 121061 - 122443 (+)
Gene ID: B111_contig_1436_89
Type: TF
Location: 122445 - 123197 (+)
Type: TF
Location: 122445 - 123197 (+)
Gene ID: B111_contig_1436_90
Type: CAZyme
Location: 123286 - 125886 (-)
Type: CAZyme
Location: 123286 - 125886 (-)
Gene ID: B111_contig_1436_91
Type: peptidase
Location: 125969 - 126898 (-)
Type: peptidase
Location: 125969 - 126898 (-)
Gene ID: B111_contig_1436_92
Type: pfam
Location: 127036 - 128280 (-)
Type: pfam
Location: 127036 - 128280 (-)
Gene ID: B111_contig_1436_93
Type: CAZyme
Location: 128282 - 129343 (-)
Type: CAZyme
Location: 128282 - 129343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B111_contig_1436_93 | omnivore > vegan | 1.14698 | 0.04414 |