Cluster: B111.bin_19_CGC21
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_00475
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_92 | B111_contig_92_1237 | 1483251 | 1483601 | + | 3.D.1.8.1 |
| TC | B111_contig_92 | B111_contig_92_1238 | 1483592 | 1484245 | + | 3.D.1.3.1 |
| TC | B111_contig_92 | B111_contig_92_1239 | 1484242 | 1485855 | + | 3.D.1.5.1 |
| TC | B111_contig_92 | B111_contig_92_1240 | 1485931 | 1487007 | + | 3.D.1.5.1 |
| STP | B111_contig_92 | B111_contig_92_1241 | 1487010 | 1487450 | + | Fer4 | Fer4 |
| TC | B111_contig_92 | B111_contig_92_1242 | 1487454 | 1487963 | + | 3.D.9.1.1 |
| TC | B111_contig_92 | B111_contig_92_1243 | 1487977 | 1488285 | + | 3.D.1.2.1 |
| TC | B111_contig_92 | B111_contig_92_1244 | 1488308 | 1490200 | + | 3.D.9.1.1 |
| TC | B111_contig_92 | B111_contig_92_1245 | 1490213 | 1491697 | + | 3.D.1.2.1 |
| TC | B111_contig_92 | B111_contig_92_1246 | 1491704 | 1493131 | + | 3.D.1.2.1 |
| TC | B111_contig_92 | B111_contig_92_1247 | 1493414 | 1495549 | - | 8.A.51.1.1 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_1248 | 1495563 | 1496249 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_92 | B111_contig_92_1249 | 1496262 | 1497269 | - | GH73 |
| pfam | B111_contig_92 | B111_contig_92_1250 | 1497345 | 1497950 | + | DUF4254 |
| CAZyme | B111_contig_92 | B111_contig_92_1251 | 1497991 | 1498959 | + | GT9 |
Gene ID: B111_contig_92_1237
Type: TC
Location: 1483251 - 1483601 (+)
Type: TC
Location: 1483251 - 1483601 (+)
Gene ID: B111_contig_92_1238
Type: TC
Location: 1483592 - 1484245 (+)
Type: TC
Location: 1483592 - 1484245 (+)
Gene ID: B111_contig_92_1239
Type: TC
Location: 1484242 - 1485855 (+)
Type: TC
Location: 1484242 - 1485855 (+)
Gene ID: B111_contig_92_1240
Type: TC
Location: 1485931 - 1487007 (+)
Type: TC
Location: 1485931 - 1487007 (+)
Gene ID: B111_contig_92_1241
Type: STP
Location: 1487010 - 1487450 (+)
Type: STP
Location: 1487010 - 1487450 (+)
Gene ID: B111_contig_92_1242
Type: TC
Location: 1487454 - 1487963 (+)
Type: TC
Location: 1487454 - 1487963 (+)
Gene ID: B111_contig_92_1243
Type: TC
Location: 1487977 - 1488285 (+)
Type: TC
Location: 1487977 - 1488285 (+)
Gene ID: B111_contig_92_1244
Type: TC
Location: 1488308 - 1490200 (+)
Type: TC
Location: 1488308 - 1490200 (+)
Gene ID: B111_contig_92_1245
Type: TC
Location: 1490213 - 1491697 (+)
Type: TC
Location: 1490213 - 1491697 (+)
Gene ID: B111_contig_92_1246
Type: TC
Location: 1491704 - 1493131 (+)
Type: TC
Location: 1491704 - 1493131 (+)
Gene ID: B111_contig_92_1247
Type: TC
Location: 1493414 - 1495549 (-)
Type: TC
Location: 1493414 - 1495549 (-)
Gene ID: B111_contig_92_1248
Type:
Location: 1495563 - 1496249 (-)
Type:
Location: 1495563 - 1496249 (-)
Gene ID: B111_contig_92_1249
Type: CAZyme
Location: 1496262 - 1497269 (-)
Type: CAZyme
Location: 1496262 - 1497269 (-)
Gene ID: B111_contig_92_1250
Type: pfam
Location: 1497345 - 1497950 (+)
Type: pfam
Location: 1497345 - 1497950 (+)
Gene ID: B111_contig_92_1251
Type: CAZyme
Location: 1497991 - 1498959 (+)
Type: CAZyme
Location: 1497991 - 1498959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.