Cluster: B111.bin_19_CGC18
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_92 | B111_contig_92_883 | 1034428 | 1040448 | - | 1.B.14.6.2 |
| STP | B111_contig_92 | B111_contig_92_884 | 1040610 | 1041791 | - | HATPase_c | Response_reg |
| CAZyme | B111_contig_92 | B111_contig_92_885 | 1041851 | 1043023 | - | GT2 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_886 | 1043020 | 1044147 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B111_contig_92 | B111_contig_92_887 | 1044152 | 1045606 | - | 2.A.66.2.23 |
| CAZyme | B111_contig_92 | B111_contig_92_888 | 1045603 | 1046547 | - | GT2 |
| pfam | B111_contig_92 | B111_contig_92_889 | 1046540 | 1047154 | - | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | B111_contig_92 | B111_contig_92_890 | 1047244 | 1048368 | - | GT4 |
| CAZyme | B111_contig_92 | B111_contig_92_891 | 1048365 | 1049567 | - | GT2 |
| CAZyme | B111_contig_92 | B111_contig_92_892 | 1049564 | 1050454 | - | GT2 |
Gene ID: B111_contig_92_883
Type: TC
Location: 1034428 - 1040448 (-)
Type: TC
Location: 1034428 - 1040448 (-)
Gene ID: B111_contig_92_884
Type: STP
Location: 1040610 - 1041791 (-)
Type: STP
Location: 1040610 - 1041791 (-)
Gene ID: B111_contig_92_885
Type: CAZyme
Location: 1041851 - 1043023 (-)
Type: CAZyme
Location: 1041851 - 1043023 (-)
Gene ID: B111_contig_92_886
Type:
Location: 1043020 - 1044147 (-)
Type:
Location: 1043020 - 1044147 (-)
Gene ID: B111_contig_92_887
Type: TC
Location: 1044152 - 1045606 (-)
Type: TC
Location: 1044152 - 1045606 (-)
Gene ID: B111_contig_92_888
Type: CAZyme
Location: 1045603 - 1046547 (-)
Type: CAZyme
Location: 1045603 - 1046547 (-)
Gene ID: B111_contig_92_889
Type: pfam
Location: 1046540 - 1047154 (-)
Type: pfam
Location: 1046540 - 1047154 (-)
Gene ID: B111_contig_92_890
Type: CAZyme
Location: 1047244 - 1048368 (-)
Type: CAZyme
Location: 1047244 - 1048368 (-)
Gene ID: B111_contig_92_891
Type: CAZyme
Location: 1048365 - 1049567 (-)
Type: CAZyme
Location: 1048365 - 1049567 (-)
Gene ID: B111_contig_92_892
Type: CAZyme
Location: 1049564 - 1050454 (-)
Type: CAZyme
Location: 1049564 - 1050454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B111_contig_92_888 | omnivore > vegan | 1.10619 | 0.04414 |