Cluster: B111.bin_19_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_01682
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_92 | B111_contig_92_777 | 925400 | 925906 | + | GT80 |
| pfam | B111_contig_92 | B111_contig_92_778 | 925982 | 926527 | - | Hydrolase_3 |
| pfam | B111_contig_92 | B111_contig_92_779 | 926503 | 927288 | - | GFO_IDH_MocA | F420_oxidored | DUF2520 |
| TC | B111_contig_92 | B111_contig_92_780 | 927295 | 928599 | - | 9.B.126.2.2 |
| pfam | B111_contig_92 | B111_contig_92_781 | 928688 | 929839 | - | Cons_hypoth95 | Methyltransf_25 | Thump_like |
| TC | B111_contig_92 | B111_contig_92_782 | 929836 | 931314 | - | 3.A.11.1.3 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_783 | 931453 | 931872 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B111_contig_92 | B111_contig_92_784 | 931865 | 932290 | - | 1.E.19.1.15 |
Gene ID: B111_contig_92_777
Type: CAZyme
Location: 925400 - 925906 (+)
Type: CAZyme
Location: 925400 - 925906 (+)
Gene ID: B111_contig_92_778
Type: pfam
Location: 925982 - 926527 (-)
Type: pfam
Location: 925982 - 926527 (-)
Gene ID: B111_contig_92_779
Type: pfam
Location: 926503 - 927288 (-)
Type: pfam
Location: 926503 - 927288 (-)
Gene ID: B111_contig_92_780
Type: TC
Location: 927295 - 928599 (-)
Type: TC
Location: 927295 - 928599 (-)
Gene ID: B111_contig_92_781
Type: pfam
Location: 928688 - 929839 (-)
Type: pfam
Location: 928688 - 929839 (-)
Gene ID: B111_contig_92_782
Type: TC
Location: 929836 - 931314 (-)
Type: TC
Location: 929836 - 931314 (-)
Gene ID: B111_contig_92_783
Type:
Location: 931453 - 931872 (-)
Type:
Location: 931453 - 931872 (-)
Gene ID: B111_contig_92_784
Type: TC
Location: 931865 - 932290 (-)
Type: TC
Location: 931865 - 932290 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.