Cluster: B111.bin_19_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_92 | B111_contig_92_648 | 738621 | 740057 | - | GH140 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_649 | 740146 | 740679 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B111_contig_92 | B111_contig_92_650 | 740698 | 742356 | - | SusD_RagB | SusD-like_3 |
| TC | B111_contig_92 | B111_contig_92_651 | 742383 | 745220 | - | 1.B.14.6.1 |
| pfam | B111_contig_92 | B111_contig_92_652 | 745262 | 747031 | - | SusD_RagB | SusD-like_3 |
| TC | B111_contig_92 | B111_contig_92_653 | 747043 | 750339 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_654 | 750438 | 750563 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_92 | B111_contig_92_655 | 750600 | 752009 | - | GH5 |
| CAZyme | B111_contig_92 | B111_contig_92_656 | 752224 | 755493 | + | GH2 |
| CAZyme | B111_contig_92 | B111_contig_92_657 | 755497 | 757506 | + | GH164 |
Gene ID: B111_contig_92_648
Type: CAZyme
Location: 738621 - 740057 (-)
Type: CAZyme
Location: 738621 - 740057 (-)
Gene ID: B111_contig_92_649
Type:
Location: 740146 - 740679 (-)
Type:
Location: 740146 - 740679 (-)
Gene ID: B111_contig_92_650
Type: pfam
Location: 740698 - 742356 (-)
Type: pfam
Location: 740698 - 742356 (-)
Gene ID: B111_contig_92_651
Type: TC
Location: 742383 - 745220 (-)
Type: TC
Location: 742383 - 745220 (-)
Gene ID: B111_contig_92_652
Type: pfam
Location: 745262 - 747031 (-)
Type: pfam
Location: 745262 - 747031 (-)
Gene ID: B111_contig_92_653
Type: TC
Location: 747043 - 750339 (-)
Type: TC
Location: 747043 - 750339 (-)
Gene ID: B111_contig_92_654
Type:
Location: 750438 - 750563 (-)
Type:
Location: 750438 - 750563 (-)
Gene ID: B111_contig_92_655
Type: CAZyme
Location: 750600 - 752009 (-)
Type: CAZyme
Location: 750600 - 752009 (-)
Gene ID: B111_contig_92_656
Type: CAZyme
Location: 752224 - 755493 (+)
Type: CAZyme
Location: 752224 - 755493 (+)
Gene ID: B111_contig_92_657
Type: CAZyme
Location: 755497 - 757506 (+)
Type: CAZyme
Location: 755497 - 757506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B111_contig_92_654 | vegetarian > vegan | 1.13051 | 0.00566 |