Cluster: B111.bin_19_CGC11
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate: host glycan
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_92 | B111_contig_92_556 | 605164 | 608502 | + | 1.B.14.6.13 |
| TC | B111_contig_92 | B111_contig_92_557 | 608508 | 610088 | + | 8.A.46.2.2 |
| pfam | B111_contig_92 | B111_contig_92_558 | 610098 | 611015 | + | GH18_BT1044-like |
| pfam | B111_contig_92 | B111_contig_92_559 | 611024 | 612289 | + | BT_3987-like_N | Laminin_G_3 | DUF4973 |
| CAZyme | B111_contig_92 | B111_contig_92_560 | 612307 | 613836 | + | GH18 |
| CAZyme | B111_contig_92 | B111_contig_92_561 | 613898 | 614377 | + | GH18 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_562 | 614458 | 614832 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B111_contig_92 | B111_contig_92_563 | 616208 | 616552 | + | HEPN |
| CAZyme | B111_contig_92 | B111_contig_92_564 | 617012 | 619663 | + | GH38 |
| CAZyme | B111_contig_92 | B111_contig_92_565 | 619673 | 622027 | + | GH92 |
| CAZyme | B111_contig_92 | B111_contig_92_566 | 622078 | 624402 | + | GH92 |
| CAZyme | B111_contig_92 | B111_contig_92_567 | 624432 | 626591 | + | GH92 |
| pfam | B111_contig_92 | B111_contig_92_568 | 626626 | 628005 | + | Lipase_GDSL | Lipase_GDSL_2 |
| NULL(UNKNOWN) | B111_contig_92 | B111_contig_92_569 | 628379 | 628474 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_92 | B111_contig_92_570 | 628471 | 630648 | + | GH36 |
| CAZyme | B111_contig_92 | B111_contig_92_571 | 630704 | 632521 | + | GH20 |
Gene ID: B111_contig_92_556
Type: TC
Location: 605164 - 608502 (+)
Type: TC
Location: 605164 - 608502 (+)
Gene ID: B111_contig_92_557
Type: TC
Location: 608508 - 610088 (+)
Type: TC
Location: 608508 - 610088 (+)
Gene ID: B111_contig_92_558
Type: pfam
Location: 610098 - 611015 (+)
Type: pfam
Location: 610098 - 611015 (+)
Gene ID: B111_contig_92_559
Type: pfam
Location: 611024 - 612289 (+)
Type: pfam
Location: 611024 - 612289 (+)
Gene ID: B111_contig_92_560
Type: CAZyme
Location: 612307 - 613836 (+)
Type: CAZyme
Location: 612307 - 613836 (+)
Gene ID: B111_contig_92_561
Type: CAZyme
Location: 613898 - 614377 (+)
Type: CAZyme
Location: 613898 - 614377 (+)
Gene ID: B111_contig_92_562
Type:
Location: 614458 - 614832 (+)
Type:
Location: 614458 - 614832 (+)
Gene ID: B111_contig_92_563
Type: pfam
Location: 616208 - 616552 (+)
Type: pfam
Location: 616208 - 616552 (+)
Gene ID: B111_contig_92_564
Type: CAZyme
Location: 617012 - 619663 (+)
Type: CAZyme
Location: 617012 - 619663 (+)
Gene ID: B111_contig_92_565
Type: CAZyme
Location: 619673 - 622027 (+)
Type: CAZyme
Location: 619673 - 622027 (+)
Gene ID: B111_contig_92_566
Type: CAZyme
Location: 622078 - 624402 (+)
Type: CAZyme
Location: 622078 - 624402 (+)
Gene ID: B111_contig_92_567
Type: CAZyme
Location: 624432 - 626591 (+)
Type: CAZyme
Location: 624432 - 626591 (+)
Gene ID: B111_contig_92_568
Type: pfam
Location: 626626 - 628005 (+)
Type: pfam
Location: 626626 - 628005 (+)
Gene ID: B111_contig_92_569
Type:
Location: 628379 - 628474 (+)
Type:
Location: 628379 - 628474 (+)
Gene ID: B111_contig_92_570
Type: CAZyme
Location: 628471 - 630648 (+)
Type: CAZyme
Location: 628471 - 630648 (+)
Gene ID: B111_contig_92_571
Type: CAZyme
Location: 630704 - 632521 (+)
Type: CAZyme
Location: 630704 - 632521 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.