Cluster: B111.bin_19_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B111.bin_19
- CGC Family ID: CGCFAM_01681
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_1835 | B111_contig_1835_41 | 37553 | 40693 | - | 2.A.6.3.6 |
| pfam | B111_contig_1835 | B111_contig_1835_42 | 40709 | 41722 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | B111_contig_1835 | B111_contig_1835_43 | 41751 | 43085 | - | 1.B.17.2.10 |
| STP | B111_contig_1835 | B111_contig_1835_44 | 43082 | 43732 | - | TetR_N |
| TC | B111_contig_1835 | B111_contig_1835_45 | 44151 | 45707 | - | 2.A.17.1.7 |
| CAZyme | B111_contig_1835 | B111_contig_1835_46 | 45811 | 47844 | + | GH13_8 |
Gene ID: B111_contig_1835_41
Type: TC
Location: 37553 - 40693 (-)
Type: TC
Location: 37553 - 40693 (-)
Gene ID: B111_contig_1835_42
Type: pfam
Location: 40709 - 41722 (-)
Type: pfam
Location: 40709 - 41722 (-)
Gene ID: B111_contig_1835_43
Type: TC
Location: 41751 - 43085 (-)
Type: TC
Location: 41751 - 43085 (-)
Gene ID: B111_contig_1835_44
Type: STP
Location: 43082 - 43732 (-)
Type: STP
Location: 43082 - 43732 (-)
Gene ID: B111_contig_1835_45
Type: TC
Location: 44151 - 45707 (-)
Type: TC
Location: 44151 - 45707 (-)
Gene ID: B111_contig_1835_46
Type: CAZyme
Location: 45811 - 47844 (+)
Type: CAZyme
Location: 45811 - 47844 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes onderdonkii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.