Cluster: B1.bin_1_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_1146 | B1_contig_1146_229 | 259827 | 261002 | - | 2.A.86.1.5 |
| CAZyme | B1_contig_1146 | B1_contig_1146_230 | 261154 | 262158 | - | GT2 |
| pfam | B1_contig_1146 | B1_contig_1146_231 | 262213 | 263415 | - | DHHA1 | tRNA_SAD |
| pfam | B1_contig_1146 | B1_contig_1146_232 | 263735 | 264250 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | B1_contig_1146 | B1_contig_1146_233 | 264729 | 265871 | + | GT28 |
Gene ID: B1_contig_1146_229
Type: TC
Location: 259827 - 261002 (-)
Type: TC
Location: 259827 - 261002 (-)
Gene ID: B1_contig_1146_230
Type: CAZyme
Location: 261154 - 262158 (-)
Type: CAZyme
Location: 261154 - 262158 (-)
Gene ID: B1_contig_1146_231
Type: pfam
Location: 262213 - 263415 (-)
Type: pfam
Location: 262213 - 263415 (-)
Gene ID: B1_contig_1146_232
Type: pfam
Location: 263735 - 264250 (-)
Type: pfam
Location: 263735 - 264250 (-)
Gene ID: B1_contig_1146_233
Type: CAZyme
Location: 264729 - 265871 (+)
Type: CAZyme
Location: 264729 - 265871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.