Cluster: B1.bin_1_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_3444 | B1_contig_3444_97 | 124443 | 125945 | + | 1.C.12.1.1 |
| pfam | B1_contig_3444 | B1_contig_3444_98 | 126142 | 126600 | + | DUF6847 |
| TC | B1_contig_3444 | B1_contig_3444_99 | 127659 | 129146 | + | 2.A.3.7.4 |
| CAZyme | B1_contig_3444 | B1_contig_3444_100 | 129305 | 131374 | + | GH42 |
| pfam | B1_contig_3444 | B1_contig_3444_101 | 131807 | 133048 | + | ADI | DDAH_eukar |
| pfam | B1_contig_3444 | B1_contig_3444_102 | 133156 | 134151 | + | OTCace | OTCace_N |
| TC | B1_contig_3444 | B1_contig_3444_103 | 134291 | 135727 | + | 2.A.3.2.3 |
Gene ID: B1_contig_3444_97
Type: TC
Location: 124443 - 125945 (+)
Type: TC
Location: 124443 - 125945 (+)
Gene ID: B1_contig_3444_98
Type: pfam
Location: 126142 - 126600 (+)
Type: pfam
Location: 126142 - 126600 (+)
Gene ID: B1_contig_3444_99
Type: TC
Location: 127659 - 129146 (+)
Type: TC
Location: 127659 - 129146 (+)
Gene ID: B1_contig_3444_100
Type: CAZyme
Location: 129305 - 131374 (+)
Type: CAZyme
Location: 129305 - 131374 (+)
Gene ID: B1_contig_3444_101
Type: pfam
Location: 131807 - 133048 (+)
Type: pfam
Location: 131807 - 133048 (+)
Gene ID: B1_contig_3444_102
Type: pfam
Location: 133156 - 134151 (+)
Type: pfam
Location: 133156 - 134151 (+)
Gene ID: B1_contig_3444_103
Type: TC
Location: 134291 - 135727 (+)
Type: TC
Location: 134291 - 135727 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.