Cluster: B1.bin_1_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_2285 | B1_contig_2285_1221 | 1345646 | 1347046 | - | GT2 |
| pfam | B1_contig_2285 | B1_contig_2285_1222 | 1347897 | 1349135 | + | UvdE |
| TC | B1_contig_2285 | B1_contig_2285_1223 | 1349220 | 1349828 | + | 2.A.107.3.1 |
| pfam | B1_contig_2285 | B1_contig_2285_1224 | 1349997 | 1351166 | - | Eno-Rase_FAD_bd | Enoyl_reductase | Eno-Rase_NADH_b |
| TC | B1_contig_2285 | B1_contig_2285_1225 | 1351403 | 1352893 | - | 2.A.3.7.2 |
| CAZyme | B1_contig_2285 | B1_contig_2285_1226 | 1353241 | 1355481 | - | GH31_1 |
Gene ID: B1_contig_2285_1221
Type: CAZyme
Location: 1345646 - 1347046 (-)
Type: CAZyme
Location: 1345646 - 1347046 (-)
Gene ID: B1_contig_2285_1222
Type: pfam
Location: 1347897 - 1349135 (+)
Type: pfam
Location: 1347897 - 1349135 (+)
Gene ID: B1_contig_2285_1223
Type: TC
Location: 1349220 - 1349828 (+)
Type: TC
Location: 1349220 - 1349828 (+)
Gene ID: B1_contig_2285_1224
Type: pfam
Location: 1349997 - 1351166 (-)
Type: pfam
Location: 1349997 - 1351166 (-)
Gene ID: B1_contig_2285_1225
Type: TC
Location: 1351403 - 1352893 (-)
Type: TC
Location: 1351403 - 1352893 (-)
Gene ID: B1_contig_2285_1226
Type: CAZyme
Location: 1353241 - 1355481 (-)
Type: CAZyme
Location: 1353241 - 1355481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.