Cluster: B1.bin_1_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_2285 | B1_contig_2285_1058 | 1159293 | 1160069 | - | CE4 |
| pfam | B1_contig_2285 | B1_contig_2285_1059 | 1160177 | 1160707 | + | DUF4364 |
| TC | B1_contig_2285 | B1_contig_2285_1060 | 1160773 | 1161879 | + | 2.A.86.1.11 |
| pfam | B1_contig_2285 | B1_contig_2285_1061 | 1162051 | 1163475 | + | LytR_cpsA_psr |
| TC | B1_contig_2285 | B1_contig_2285_1062 | 1163530 | 1164171 | - | 1.C.113.1.1 |
| pfam | B1_contig_2285 | B1_contig_2285_1063 | 1164297 | 1164791 | + | Cupin_5 |
| TC | B1_contig_2285 | B1_contig_2285_1064 | 1164904 | 1166463 | - | 2.A.49.5.5 |
Gene ID: B1_contig_2285_1058
Type: CAZyme
Location: 1159293 - 1160069 (-)
Type: CAZyme
Location: 1159293 - 1160069 (-)
Gene ID: B1_contig_2285_1059
Type: pfam
Location: 1160177 - 1160707 (+)
Type: pfam
Location: 1160177 - 1160707 (+)
Gene ID: B1_contig_2285_1060
Type: TC
Location: 1160773 - 1161879 (+)
Type: TC
Location: 1160773 - 1161879 (+)
Gene ID: B1_contig_2285_1061
Type: pfam
Location: 1162051 - 1163475 (+)
Type: pfam
Location: 1162051 - 1163475 (+)
Gene ID: B1_contig_2285_1062
Type: TC
Location: 1163530 - 1164171 (-)
Type: TC
Location: 1163530 - 1164171 (-)
Gene ID: B1_contig_2285_1063
Type: pfam
Location: 1164297 - 1164791 (+)
Type: pfam
Location: 1164297 - 1164791 (+)
Gene ID: B1_contig_2285_1064
Type: TC
Location: 1164904 - 1166463 (-)
Type: TC
Location: 1164904 - 1166463 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.