Cluster: B1.bin_1_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_2285 | B1_contig_2285_593 | 670029 | 670826 | - | 1.A.16.3.3 |
| NULL(UNKNOWN) | B1_contig_2285 | B1_contig_2285_594 | 671034 | 671654 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B1_contig_2285 | B1_contig_2285_595 | 671632 | 671925 | - | GIY-YIG |
| CAZyme | B1_contig_2285 | B1_contig_2285_596 | 672176 | 674236 | + | GH39 |
Gene ID: B1_contig_2285_593
Type: TC
Location: 670029 - 670826 (-)
Type: TC
Location: 670029 - 670826 (-)
Gene ID: B1_contig_2285_594
Type:
Location: 671034 - 671654 (-)
Type:
Location: 671034 - 671654 (-)
Gene ID: B1_contig_2285_595
Type: pfam
Location: 671632 - 671925 (-)
Type: pfam
Location: 671632 - 671925 (-)
Gene ID: B1_contig_2285_596
Type: CAZyme
Location: 672176 - 674236 (+)
Type: CAZyme
Location: 672176 - 674236 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.