Cluster: B1.bin_1_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_2285 | B1_contig_2285_567 | 638237 | 640816 | - | GH38 |
| pfam | B1_contig_2285 | B1_contig_2285_568 | 641054 | 641893 | - | S-methyl_trans |
| pfam | B1_contig_2285 | B1_contig_2285_569 | 642135 | 642863 | + | Acyltransferase |
| TC | B1_contig_2285 | B1_contig_2285_570 | 642907 | 644295 | - | 2.A.25.1.4 |
Gene ID: B1_contig_2285_567
Type: CAZyme
Location: 638237 - 640816 (-)
Type: CAZyme
Location: 638237 - 640816 (-)
Gene ID: B1_contig_2285_568
Type: pfam
Location: 641054 - 641893 (-)
Type: pfam
Location: 641054 - 641893 (-)
Gene ID: B1_contig_2285_569
Type: pfam
Location: 642135 - 642863 (+)
Type: pfam
Location: 642135 - 642863 (+)
Gene ID: B1_contig_2285_570
Type: TC
Location: 642907 - 644295 (-)
Type: TC
Location: 642907 - 644295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.