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Cluster: B1.bin_1_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B1_contig_2285 B1_contig_2285_156 170621 172618 - 2.A.72.1.3
pfam B1_contig_2285 B1_contig_2285_157 172939 173451 - Ferritin
TF B1_contig_2285 B1_contig_2285_158 173601 174419 - HTH_AraC | HTH_AraC
CAZyme B1_contig_2285 B1_contig_2285_159 174580 176412 + GH20
NULL(UNKNOWN) B1_contig_2285 B1_contig_2285_160 176530 176997 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B1_contig_2285 B1_contig_2285_161 177118 177891 - Tim44
TC B1_contig_2285 B1_contig_2285_162 178022 179443 - 9.A.11.1.1
TC B1_contig_2285 B1_contig_2285_163 179668 181176 - 2.A.118.1.7
Gene ID: B1_contig_2285_156
Type: TC
Location: 170621 - 172618 (-)
Gene ID: B1_contig_2285_157
Type: pfam
Location: 172939 - 173451 (-)
Gene ID: B1_contig_2285_158
Type: TF
Location: 173601 - 174419 (-)
Gene ID: B1_contig_2285_159
Type: CAZyme
Location: 174580 - 176412 (+)
Gene ID: B1_contig_2285_160
Type:
Location: 176530 - 176997 (+)
Gene ID: B1_contig_2285_161
Type: pfam
Location: 177118 - 177891 (-)
Gene ID: B1_contig_2285_162
Type: TC
Location: 178022 - 179443 (-)
Gene ID: B1_contig_2285_163
Type: TC
Location: 179668 - 181176 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Sarcina
→
Species
Sarcina perfringens

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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