Cluster: B1.bin_1_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B1_contig_2285 | B1_contig_2285_16 | 12265 | 13716 | + | 4.A.1.1.7 |
| NULL(UNKNOWN) | B1_contig_2285 | B1_contig_2285_17 | 13973 | 14299 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B1_contig_2285 | B1_contig_2285_18 | 14331 | 14720 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B1_contig_2285 | B1_contig_2285_19 | 15308 | 21736 | + | CBM51 | CBM51 | CBM51 |
Gene ID: B1_contig_2285_16
Type: TC
Location: 12265 - 13716 (+)
Type: TC
Location: 12265 - 13716 (+)
Gene ID: B1_contig_2285_17
Type:
Location: 13973 - 14299 (+)
Type:
Location: 13973 - 14299 (+)
Gene ID: B1_contig_2285_18
Type:
Location: 14331 - 14720 (+)
Type:
Location: 14331 - 14720 (+)
Gene ID: B1_contig_2285_19
Type: CAZyme
Location: 15308 - 21736 (+)
Type: CAZyme
Location: 15308 - 21736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.