Cluster: B1.bin_1_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_1146 | B1_contig_1146_571 | 663396 | 664316 | + | CE4 |
| TC | B1_contig_1146 | B1_contig_1146_572 | 664478 | 664876 | - | 1.E.19.1.7 |
| CAZyme | B1_contig_1146 | B1_contig_1146_573 | 665198 | 666226 | - | GH25 |
| pfam | B1_contig_1146 | B1_contig_1146_574 | 666492 | 666890 | + | Rubrerythrin |
| TC | B1_contig_1146 | B1_contig_1146_575 | 666971 | 668752 | - | 3.A.1.135.7 |
| TC | B1_contig_1146 | B1_contig_1146_576 | 668745 | 670478 | - | 3.A.1.135.7 |
Gene ID: B1_contig_1146_571
Type: CAZyme
Location: 663396 - 664316 (+)
Type: CAZyme
Location: 663396 - 664316 (+)
Gene ID: B1_contig_1146_572
Type: TC
Location: 664478 - 664876 (-)
Type: TC
Location: 664478 - 664876 (-)
Gene ID: B1_contig_1146_573
Type: CAZyme
Location: 665198 - 666226 (-)
Type: CAZyme
Location: 665198 - 666226 (-)
Gene ID: B1_contig_1146_574
Type: pfam
Location: 666492 - 666890 (+)
Type: pfam
Location: 666492 - 666890 (+)
Gene ID: B1_contig_1146_575
Type: TC
Location: 666971 - 668752 (-)
Type: TC
Location: 666971 - 668752 (-)
Gene ID: B1_contig_1146_576
Type: TC
Location: 668745 - 670478 (-)
Type: TC
Location: 668745 - 670478 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.