Cluster: B1.bin_1_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B1.bin_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B1_contig_1146 | B1_contig_1146_87 | 84724 | 91038 | - | CBM32 | CBM32 | CBM32 | CBM32 | GH89 |
| pfam | B1_contig_1146 | B1_contig_1146_88 | 91379 | 91552 | - | SASP |
| TC | B1_contig_1146 | B1_contig_1146_89 | 91659 | 93035 | - | 2.A.66.1.28 |
| NULL(UNKNOWN) | B1_contig_1146 | B1_contig_1146_90 | 93224 | 93682 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B1_contig_1146 | B1_contig_1146_91 | 93837 | 95273 | - | 3.A.18.1.1 |
| pfam | B1_contig_1146 | B1_contig_1146_92 | 95934 | 97055 | - | Gly_kinase |
| TC | B1_contig_1146 | B1_contig_1146_93 | 97279 | 98538 | - | 2.A.8.1.9 |
Gene ID: B1_contig_1146_87
Type: CAZyme
Location: 84724 - 91038 (-)
Type: CAZyme
Location: 84724 - 91038 (-)
Gene ID: B1_contig_1146_88
Type: pfam
Location: 91379 - 91552 (-)
Type: pfam
Location: 91379 - 91552 (-)
Gene ID: B1_contig_1146_89
Type: TC
Location: 91659 - 93035 (-)
Type: TC
Location: 91659 - 93035 (-)
Gene ID: B1_contig_1146_90
Type:
Location: 93224 - 93682 (-)
Type:
Location: 93224 - 93682 (-)
Gene ID: B1_contig_1146_91
Type: TC
Location: 93837 - 95273 (-)
Type: TC
Location: 93837 - 95273 (-)
Gene ID: B1_contig_1146_92
Type: pfam
Location: 95934 - 97055 (-)
Type: pfam
Location: 95934 - 97055 (-)
Gene ID: B1_contig_1146_93
Type: TC
Location: 97279 - 98538 (-)
Type: TC
Location: 97279 - 98538 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.