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Cluster: AG527_2_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_79312 k141_79312_2 156 3914 + CBM32
CAZyme k141_79312 k141_79312_3 4526 5422 - GT14
STP k141_79312 k141_79312_4 5670 6869 - PALP
TC k141_79312 k141_79312_5 7219 8745 - 3.A.1.26.1
TC k141_79312 k141_79312_6 8786 10870 - 2.A.16.2.2
pfam k141_79312 k141_79312_7 10890 12608 - DHH | DHHA1 | RecJ_OB
TC k141_79312 k141_79312_8 13270 14904 + 3.A.1.121.4
Gene ID: k141_79312_2
Type: CAZyme
Location: 156 - 3914 (+)
Gene ID: k141_79312_3
Type: CAZyme
Location: 4526 - 5422 (-)
Gene ID: k141_79312_4
Type: STP
Location: 5670 - 6869 (-)
Gene ID: k141_79312_5
Type: TC
Location: 7219 - 8745 (-)
Gene ID: k141_79312_6
Type: TC
Location: 8786 - 10870 (-)
Gene ID: k141_79312_7
Type: pfam
Location: 10890 - 12608 (-)
Gene ID: k141_79312_8
Type: TC
Location: 13270 - 14904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_79312_8 omnivore > vegetarian 1.37731 0.03643

🧭 Explore Read Mapping of CGC

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