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Cluster: AG527_2_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_319523 k141_319523_33 37435 39393 + GH133
CAZyme k141_319523 k141_319523_34 39556 40833 + GT4
CAZyme k141_319523 k141_319523_35 40884 42356 + GH57
pfam k141_319523 k141_319523_36 42775 43548 + Poly_export | SLBB | SLBB_2
pfam k141_319523 k141_319523_37 44385 45680 + LRR_5 | LRR_5 | LRR_5
CAZyme k141_319523 k141_319523_38 45774 47387 + GH20
pfam k141_319523 k141_319523_39 47415 48803 + RicinB_lectin_2
NULL(UNKNOWN) k141_319523 k141_319523_40 49064 49324 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_319523 k141_319523_41 49338 49730 - 1.E.34.4.2
Gene ID: k141_319523_33
Type: CAZyme
Location: 37435 - 39393 (+)
Gene ID: k141_319523_34
Type: CAZyme
Location: 39556 - 40833 (+)
Gene ID: k141_319523_35
Type: CAZyme
Location: 40884 - 42356 (+)
Gene ID: k141_319523_36
Type: pfam
Location: 42775 - 43548 (+)
Gene ID: k141_319523_37
Type: pfam
Location: 44385 - 45680 (+)
Gene ID: k141_319523_38
Type: CAZyme
Location: 45774 - 47387 (+)
Gene ID: k141_319523_39
Type: pfam
Location: 47415 - 48803 (+)
Gene ID: k141_319523_40
Type:
Location: 49064 - 49324 (-)
Gene ID: k141_319523_41
Type: TC
Location: 49338 - 49730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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