Cluster: AG404_bin.37_sub_CGC50
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: AG404_bin.37_sub
- CGC Family ID: CGCFAM_06741
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_293514 | k141_293514_16 | 11650 | 12783 | - | GT19 |
| pfam | k141_293514 | k141_293514_17 | 12932 | 13702 | - | SurE |
| TC | k141_293514 | k141_293514_18 | 13976 | 14740 | + | 8.A.3.2.3 |
| pfam | k141_293514 | k141_293514_19 | 14747 | 15631 | + | ParBc | HTH_ParB | ParB_dimer |
| pfam | k141_293514 | k141_293514_20 | 15643 | 16434 | + | DUF5683 |
| CAZyme | k141_293514 | k141_293514_21 | 16438 | 17676 | + | GH23 |
| STP | k141_293514 | k141_293514_22 | 17782 | 20052 | + | HD |
| TF | k141_293514 | k141_293514_23 | 20049 | 20396 | - | MerR |
| TC | k141_293514 | k141_293514_24 | 20414 | 21382 | - | 1.A.34.1.3 |
| pfam | k141_293514 | k141_293514_25 | 21513 | 24134 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| CAZyme | k141_293514 | k141_293514_26 | 24223 | 25236 | - | GH43_29 |
| CAZyme | k141_293514 | k141_293514_27 | 25406 | 27418 | - | GH67 |
| CAZyme | k141_293514 | k141_293514_28 | 27557 | 28555 | - | GH43_1 |
| CAZyme | k141_293514 | k141_293514_29 | 28695 | 29810 | - | GH10 |
| TC | k141_293514 | k141_293514_30 | 29865 | 31358 | - | 2.A.2.3.4 |
| CAZyme | k141_293514 | k141_293514_31 | 31485 | 33098 | - | CE20 | CE20 |
Gene ID: k141_293514_16
Type: CAZyme
Location: 11650 - 12783 (-)
Type: CAZyme
Location: 11650 - 12783 (-)
Gene ID: k141_293514_17
Type: pfam
Location: 12932 - 13702 (-)
Type: pfam
Location: 12932 - 13702 (-)
Gene ID: k141_293514_18
Type: TC
Location: 13976 - 14740 (+)
Type: TC
Location: 13976 - 14740 (+)
Gene ID: k141_293514_19
Type: pfam
Location: 14747 - 15631 (+)
Type: pfam
Location: 14747 - 15631 (+)
Gene ID: k141_293514_20
Type: pfam
Location: 15643 - 16434 (+)
Type: pfam
Location: 15643 - 16434 (+)
Gene ID: k141_293514_21
Type: CAZyme
Location: 16438 - 17676 (+)
Type: CAZyme
Location: 16438 - 17676 (+)
Gene ID: k141_293514_22
Type: STP
Location: 17782 - 20052 (+)
Type: STP
Location: 17782 - 20052 (+)
Gene ID: k141_293514_23
Type: TF
Location: 20049 - 20396 (-)
Type: TF
Location: 20049 - 20396 (-)
Gene ID: k141_293514_24
Type: TC
Location: 20414 - 21382 (-)
Type: TC
Location: 20414 - 21382 (-)
Gene ID: k141_293514_25
Type: pfam
Location: 21513 - 24134 (+)
Type: pfam
Location: 21513 - 24134 (+)
Gene ID: k141_293514_26
Type: CAZyme
Location: 24223 - 25236 (-)
Type: CAZyme
Location: 24223 - 25236 (-)
Gene ID: k141_293514_27
Type: CAZyme
Location: 25406 - 27418 (-)
Type: CAZyme
Location: 25406 - 27418 (-)
Gene ID: k141_293514_28
Type: CAZyme
Location: 27557 - 28555 (-)
Type: CAZyme
Location: 27557 - 28555 (-)
Gene ID: k141_293514_29
Type: CAZyme
Location: 28695 - 29810 (-)
Type: CAZyme
Location: 28695 - 29810 (-)
Gene ID: k141_293514_30
Type: TC
Location: 29865 - 31358 (-)
Type: TC
Location: 29865 - 31358 (-)
Gene ID: k141_293514_31
Type: CAZyme
Location: 31485 - 33098 (-)
Type: CAZyme
Location: 31485 - 33098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola cellulolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.