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Cluster: AG404_bin.37_sub_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_222802 k141_222802_19 31586 32377 - GH16_3
CAZyme k141_222802 k141_222802_20 32423 34432 - GH20
CAZyme k141_222802 k141_222802_21 34454 36772 - GH20
pfam k141_222802 k141_222802_22 36888 38747 - SusD_RagB | SusD-like_2 | SusD-like_3
TC k141_222802 k141_222802_23 38786 41995 - 1.B.14.6.1
TF k141_222802 k141_222802_24 42273 46226 + HTH_AraC
CAZyme k141_222802 k141_222802_25 46486 48279 + GH29
sulfatase k141_222802 k141_222802_26 48381 49964 + S1_11
CAZyme k141_222802 k141_222802_27 50113 53712 + GH2
pfam k141_222802 k141_222802_28 53764 54741 - GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
TC k141_222802 k141_222802_29 54827 57289 + 3.A.11.3.1
Gene ID: k141_222802_19
Type: CAZyme
Location: 31586 - 32377 (-)
Gene ID: k141_222802_20
Type: CAZyme
Location: 32423 - 34432 (-)
Gene ID: k141_222802_21
Type: CAZyme
Location: 34454 - 36772 (-)
Gene ID: k141_222802_22
Type: pfam
Location: 36888 - 38747 (-)
Gene ID: k141_222802_23
Type: TC
Location: 38786 - 41995 (-)
Gene ID: k141_222802_24
Type: TF
Location: 42273 - 46226 (+)
Gene ID: k141_222802_25
Type: CAZyme
Location: 46486 - 48279 (+)
Gene ID: k141_222802_26
Type: sulfatase
Location: 48381 - 49964 (+)
Gene ID: k141_222802_27
Type: CAZyme
Location: 50113 - 53712 (+)
Gene ID: k141_222802_28
Type: pfam
Location: 53764 - 54741 (-)
Gene ID: k141_222802_29
Type: TC
Location: 54827 - 57289 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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