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Cluster: AG404_bin.37_sub_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9641 k141_9641_23 30684 33644 + 1.B.14.6.1
TC k141_9641 k141_9641_24 33663 35240 + 8.A.46.1.1
pfam k141_9641 k141_9641_25 35253 37022 + SusE | DUF5111 | DUF5114
CAZyme k141_9641 k141_9641_26 37036 38115 + GH53
CAZyme k141_9641 k141_9641_27 38195 41713 + GH2 | GH53
TF k141_9641 k141_9641_28 41778 42689 - HTH_AraC
pfam k141_9641 k141_9641_29 42864 43937 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_9641 k141_9641_30 43934 47074 + 2.A.6.2.38
pfam k141_9641 k141_9641_31 47211 48560 + OEP | OEP
pfam k141_9641 k141_9641_32 48747 49808 - DUF3810
TC k141_9641 k141_9641_33 50046 51278 + 9.B.156.3.1
pfam k141_9641 k141_9641_34 51301 51723 + YbeY
TC k141_9641 k141_9641_35 51844 53715 + 1.C.39.4.5
Gene ID: k141_9641_23
Type: TC
Location: 30684 - 33644 (+)
Gene ID: k141_9641_24
Type: TC
Location: 33663 - 35240 (+)
Gene ID: k141_9641_25
Type: pfam
Location: 35253 - 37022 (+)
Gene ID: k141_9641_26
Type: CAZyme
Location: 37036 - 38115 (+)
Gene ID: k141_9641_27
Type: CAZyme
Location: 38195 - 41713 (+)
Gene ID: k141_9641_28
Type: TF
Location: 41778 - 42689 (-)
Gene ID: k141_9641_29
Type: pfam
Location: 42864 - 43937 (+)
Gene ID: k141_9641_30
Type: TC
Location: 43934 - 47074 (+)
Gene ID: k141_9641_31
Type: pfam
Location: 47211 - 48560 (+)
Gene ID: k141_9641_32
Type: pfam
Location: 48747 - 49808 (-)
Gene ID: k141_9641_33
Type: TC
Location: 50046 - 51278 (+)
Gene ID: k141_9641_34
Type: pfam
Location: 51301 - 51723 (+)
Gene ID: k141_9641_35
Type: TC
Location: 51844 - 53715 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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