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Cluster: AG400_49_CGC84

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16634 k141_16634_3 1893 6110 - GH5_25
TF k141_16634 k141_16634_4 6326 6994 - GntR
pfam k141_16634 k141_16634_5 7400 9055 + Prismane
TC k141_16634 k141_16634_6 9132 9557 + 1.A.22.1.1
TC k141_16634 k141_16634_7 9658 11388 - 2.A.21.9.1
pfam k141_16634 k141_16634_8 11390 12511 - KdpD
NULL(UNKNOWN) k141_16634 k141_16634_9 12525 13289 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_16634 k141_16634_10 13320 13898 - 3.A.3.7.2
TC k141_16634 k141_16634_11 13923 15965 - 3.A.3.7.2
TC k141_16634 k141_16634_12 15993 17702 - 3.A.3.7.2
Gene ID: k141_16634_3
Type: CAZyme
Location: 1893 - 6110 (-)
Gene ID: k141_16634_4
Type: TF
Location: 6326 - 6994 (-)
Gene ID: k141_16634_5
Type: pfam
Location: 7400 - 9055 (+)
Gene ID: k141_16634_6
Type: TC
Location: 9132 - 9557 (+)
Gene ID: k141_16634_7
Type: TC
Location: 9658 - 11388 (-)
Gene ID: k141_16634_8
Type: pfam
Location: 11390 - 12511 (-)
Gene ID: k141_16634_9
Type:
Location: 12525 - 13289 (-)
Gene ID: k141_16634_10
Type: TC
Location: 13320 - 13898 (-)
Gene ID: k141_16634_11
Type: TC
Location: 13923 - 15965 (-)
Gene ID: k141_16634_12
Type: TC
Location: 15993 - 17702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_16634_6 vegetarian > vegan 1.05198 0.01316
k141_16634_12 vegan > omnivore 1.12132 0.00779

🧭 Explore Read Mapping of CGC

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