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Cluster: AG400_49_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_163416 k141_163416_398 481626 484751 + 1.B.14.6.1
pfam k141_163416 k141_163416_399 484773 486365 + SusD_RagB | SusD-like_3
TC k141_163416 k141_163416_400 486600 489833 + 1.B.14.6.1
pfam k141_163416 k141_163416_401 489847 491538 + SusD_RagB | SusD-like_3
pfam k141_163416 k141_163416_402 491559 492920 + DUF6055
CAZyme k141_163416 k141_163416_403 493025 495010 + GH97
CAZyme k141_163416 k141_163416_404 495154 497607 + GH127
CAZyme k141_163416 k141_163416_405 497816 500212 + GH127
Gene ID: k141_163416_398
Type: TC
Location: 481626 - 484751 (+)
Gene ID: k141_163416_399
Type: pfam
Location: 484773 - 486365 (+)
Gene ID: k141_163416_400
Type: TC
Location: 486600 - 489833 (+)
Gene ID: k141_163416_401
Type: pfam
Location: 489847 - 491538 (+)
Gene ID: k141_163416_402
Type: pfam
Location: 491559 - 492920 (+)
Gene ID: k141_163416_403
Type: CAZyme
Location: 493025 - 495010 (+)
Gene ID: k141_163416_404
Type: CAZyme
Location: 495154 - 497607 (+)
Gene ID: k141_163416_405
Type: CAZyme
Location: 497816 - 500212 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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