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Cluster: AG400_49_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_58835 k141_58835_27 28542 30185 + GH172
TF k141_58835 k141_58835_28 30250 32961 + HTH_AraC | HTH_AraC
TC k141_58835 k141_58835_29 33147 36305 + 1.B.14.6.1
pfam k141_58835 k141_58835_30 36325 38046 + SusD_RagB | SusD-like_3
CAZyme k141_58835 k141_58835_31 38148 39800 + GH32
CAZyme k141_58835 k141_58835_32 39837 41420 + GH32
STP k141_58835 k141_58835_33 41432 42304 + PfkB
TC k141_58835 k141_58835_34 42307 43470 + 2.A.1.7.17
Gene ID: k141_58835_27
Type: CAZyme
Location: 28542 - 30185 (+)
Gene ID: k141_58835_28
Type: TF
Location: 30250 - 32961 (+)
Gene ID: k141_58835_29
Type: TC
Location: 33147 - 36305 (+)
Gene ID: k141_58835_30
Type: pfam
Location: 36325 - 38046 (+)
Gene ID: k141_58835_31
Type: CAZyme
Location: 38148 - 39800 (+)
Gene ID: k141_58835_32
Type: CAZyme
Location: 39837 - 41420 (+)
Gene ID: k141_58835_33
Type: STP
Location: 41432 - 42304 (+)
Gene ID: k141_58835_34
Type: TC
Location: 42307 - 43470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_58835_34 vegetarian > vegan 1.12519 0.02197

🧭 Explore Read Mapping of CGC

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